Evidence map›Paper›PMID 28288209›Full record

ArticlePloS one2017

Contrasting antibody responses to intrasubtype superinfection with CRF02_AG.

Colleen R Courtney, Luzia Mayr, Aubin J Nanfack, Andrew N Banin, Michael Tuen, Ruimin Pan, Xunqing Jiang, Xiang-Peng Kong, Allison R Kirkpatrick, Daniel Bruno and 7 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 23 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 4 institutions in 2 countries.

Colleen R CourtneyDepartment of Microbiology, New York University School of Medicine, New York, NY, United States of America.
Luzia MayrDepartment of Pathology, New York University School of Medicine, New York, NY, United States of America.
Aubin J NanfackDepartment of Pathology, New York University School of Medicine, New York, NY, United States of America.
Andrew N BaninDepartment of Pathology, New York University School of Medicine, New York, NY, United States of America.
Michael TuenDepartment of Pathology, New York University School of Medicine, New York, NY, United States of America.
Ruimin PanDepartment of Biochemistry and Molecular Pharmacology, New York University School of Medicine, New York, NY, United States of America.
Xunqing JiangDepartment of Biochemistry and Molecular Pharmacology, New York University School of Medicine, New York, NY, United States of America.
Xiang-Peng KongDepartment of Biochemistry and Molecular Pharmacology, New York University School of Medicine, New York, NY, United States of America.
Allison R KirkpatrickLaboratory of Immunoregulation, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD, United States of America.
Daniel BrunoGenomics Unit, Research Technologies Branch, Rocky Mountain Laboratories, Division of Intramural Research, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Hamilton, MT, United States of America.
Craig A MartensGenomics Unit, Research Technologies Branch, Rocky Mountain Laboratories, Division of Intramural Research, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Hamilton, MT, United States of America.
Lydia SykoraGenomics Unit, Research Technologies Branch, Rocky Mountain Laboratories, Division of Intramural Research, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Hamilton, MT, United States of America.
Stephen F PorcellaGenomics Unit, Research Technologies Branch, Rocky Mountain Laboratories, Division of Intramural Research, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Hamilton, MT, United States of America.
Andrew D ReddLaboratory of Immunoregulation, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD, United States of America.
Thomas C QuinnLaboratory of Immunoregulation, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD, United States of America.
Phillipe N NyambiDepartment of Pathology, New York University School of Medicine, New York, NY, United States of America.
Ralf DürrDepartment of Pathology, New York University School of Medicine, New York, NY, United States of America.
New York University · USNational Institutes of Health · USNational Institute of Allergy and Infectious Diseases · USVA NY Harbor Healthcare System · US

Funding

Vaccine Response and Immunotherapeutics SWGP30AI094189 · NIAID · JOHNS HOPKINS UNIVERSITY · PI Richard E. Chaisson · 2012 to 2026
$67.0M
International Studies of the Acquired Immune Deficiency Syndrome (AIDS)ZIAAI000361 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI REDD, ANDREW · 2009 to 2025
$15.8M
Vaccines to Induce Functional Antibodies Targeting the V2 Loop P01AI100151 · NIAID · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI KONG, XIANGPENG, ZOLLA-PAZNER, SUSAN B · 2012 to 2017
$15.4M
Viral Evolution and Humoral Immune Response to Dual HIV-1 InfectionR01AI083142 · NIAID · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI GORNY, MIROSLAW K · 2010 to 2015
$2.6M
Training Program on HIV Diversity and Drug Resistance-Enhancing Research CapacityD43TW009604 · FIC · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI GORNY, MIROSLAW K · 2013 to 2017
$1.4M
FIC NIH HHS D43 TW009604NIAID NIH HHS P01 AI100151NIAID NIH HHS P30 AI094189NIAID NIH HHS R01 AI083142
6 · The paper itself

Abstract

HIV superinfection describes the sequential infection of an individual with two or more unrelated HIV strains. Intersubtype superinfection has been shown to cause a broader and more potent heterologous neutralizing antibody response when compared to singly infected controls, yet the effects of intrasubtype superinfection remain controversial. Longitudinal samples were analyzed phylogenetically for pol and env regions using Next-Generation Sequencing and envelope cloning. The impact of CRF02_AG intrasubtype superinfection was assessed for heterologous neutralization and antibody binding responses. We compared two cases of CRF02_AG intrasubtype superinfection that revealed complete replacement of the initial virus by superinfecting CRF02_AG variants with signs of recombination. NYU6564, who became superinfected at an early time point, exhibited greater changes in antibody binding profiles and generated a more potent neutralizing antibody response post-superinfection compared to NYU6501. In contrast, superinfection occurred at a later time point in NYU6501 with strains harboring significantly longer V1V2 regions with no observable changes in neutralization patterns. Here we show that CRF02_AG intrasubtype superinfection can induce a cross-subtype neutralizing antibody response, and our data suggest timing and/or superinfecting viral envelope characteristics as contributing factors. These results highlight differential outcomes in intrasubtype superinfection and provide the first insight into cases with CRF02_AG, the fourth most prevalent HIV-1 strain worldwide.

Indexed as

Antibodies, NeutralizingAntibody Formationenv Gene Products, Human Immunodeficiency VirusEpitopesFemaleHIV-1HIV InfectionsHumansPhylogenypol Gene Products, Human Immunodeficiency VirusPregnancyRecombination, GeneticSuperinfectionViral LoadAntibodies, Neutralizingenv Gene Products, Human Immunodeficiency VirusEpitopespol Gene Products, Human Immunodeficiency Virus

Identifiers

PMID28288209
PMCPMC5348025
OpenAlexW2596501475

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.