Evidence map›Paper›PMID 28287557›Full record

ArticleJournal of visualized experiments : JoVE2017

The Power of Simplicity: Sea Urchin Embryos as in Vivo Developmental Models for Studying Complex Cell-to-cell Signaling Network Interactions.

Ryan C Range, Marina Martinez-Bartolomé, Stephanie D Burr

Abstract readVideo-Audio Media
In one paragraph

Article in Journal of visualized experiments : JoVE, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.6field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 5 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Ryan C RangeDepartment of Biological Sciences, Mississippi State University; range@biology.msstate.edu.
Marina Martinez-BartoloméDepartment of Biological Sciences, Mississippi State University.
Stephanie D BurrDepartment of Biological Sciences, Mississippi State University.
Mississippi State University · US

Funding

Wnt signaling pathway interactions in early anterior-posterior specification and patterningR15HD088272 · NICHD · MISSISSIPPI STATE UNIVERSITY · PI RANGE, RYAN CHRISTOPHER · 2016 to 2021
$886k
NICHD NIH HHS R15 HD088272
6 · The paper itself

Abstract

Remarkably few cell-to-cell signal transduction pathways are necessary during embryonic development to generate the large variety of cell types and tissues in the adult body form. Yet, each year more components of individual signaling pathways are discovered, and studies indicate that depending on the context there is significant cross-talk among most of these pathways. This complexity makes studying cell-to-cell signaling in any in vivo developmental model system a difficult task. In addition, efficient functional analyses are required to characterize molecules associated with signaling pathways identified from the large data sets generated by next generation differential screens. Here, we illustrate a straightforward method to efficiently identify components of signal transduction pathways governing cell fate and axis specification in sea urchin embryos. The genomic and morphological simplicity of embryos similar to those of the sea urchin make them powerful in vivo developmental models for understanding complex signaling interactions. The methodology described here can be used as a template for identifying novel signal transduction molecules in individual pathways as well as the interactions among the molecules in the various pathways in many other organisms.

Indexed as

AnimalsCell CommunicationCell DifferentiationEmbryonic DevelopmentEmbryo, NonmammalianGene Expression Regulation, DevelopmentalHigh-Throughput Nucleotide SequencingModels, AnimalModels, BiologicalSea UrchinsSignal Transduction

Identifiers

PMID28287557
PMCPMC5408757
OpenAlexW2589029430

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.