Evidence map›Paper›PMID 28287182›Full record

ArticleScientific reports2017

DNA-conjugated gold nanoparticles based colorimetric assay to assess helicase activity: a novel route to screen potential helicase inhibitors.

Jashmini Deka, Aditya Mojumdar, Pietro Parisse, Silvia Onesti, Loredana Casalis

Abstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Jashmini DekaNano Innovation Laboratory, Elettra-Sincrotrone Trieste S.C.p.A., Trieste, Italy.
Aditya MojumdarStructural Biology Laboratory, Elettra-Sincrotrone Trieste S.C.p.A., Trieste, Italy.
Pietro ParisseNano Innovation Laboratory, Elettra-Sincrotrone Trieste S.C.p.A., Trieste, Italy.
Silvia OnestiStructural Biology Laboratory, Elettra-Sincrotrone Trieste S.C.p.A., Trieste, Italy.
Loredana CasalisNano Innovation Laboratory, Elettra-Sincrotrone Trieste S.C.p.A., Trieste, Italy.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Helicase are essential enzymes which are widespread in all life-forms. Due to their central role in nucleic acid metabolism, they are emerging as important targets for anti-viral, antibacterial and anti-cancer drugs. The development of easy, cheap, fast and robust biochemical assays to measure helicase activity, overcoming the limitations of the current methods, is a pre-requisite for the discovery of helicase inhibitors through high-throughput screenings. We have developed a method which exploits the optical properties of DNA-conjugated gold nanoparticles (AuNP) and meets the required criteria. The method was tested with the catalytic domain of the human RecQ4 helicase and compared with a conventional FRET-based assay. The AuNP-based assay produced similar results but is simpler, more robust and cheaper than FRET. Therefore, our nanotechnology-based platform shows the potential to provide a useful alternative to the existing conventional methods for following helicase activity and to screen small-molecule libraries as potential helicase inhibitors.

Indexed as

Base SequenceCatalytic DomainColorimetryDNAEnzyme AssaysFluorescence Resonance Energy TransferGoldHigh-Throughput Screening AssaysHumansMetal NanoparticlesRecQ HelicasesSmall Molecule LibrariesDNAGoldRecQ HelicasesSmall Molecule Libraries

Identifiers

PMID28287182
PMCPMC5347027

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.