Evidence map›Paper›PMID 28287135›Full record

ArticleScientific reports2017

Visual detection and differentiation of Classic Swine Fever Virus strains using nucleic acid sequence-based amplification (NASBA) and G-quadruplex DNAzyme assay.

Xiaolu Lu, Xueyao Shi, Gege Wu, Tiantian Wu, Rui Qin, Yi Wang

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed, 1 pooled it
5.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 1 synthesis or guideline pooled it, 43 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Review
  4. Article
  5. Article
  6. Dual-Mode Gold Nanoparticle-Based Method for Early Detection ofInternational journal of molecular sciences · 2022
    Article
  7. Article
  8. Review
  9. Review
  10. Article
  11. Article
  12. Review
  13. Review
  14. Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Xiaolu LuSchool of Environmental Studies, China University of Geosciences (Wuhan), Wuhan 430074, P. R. China.
Xueyao ShiCollege of Life Sciences, South-central University for Nationalities, Wuhan 430074, P.R. China.
Gege WuCollege of Life Sciences, South-central University for Nationalities, Wuhan 430074, P.R. China.
Tiantian WuCollege of Life Sciences, South-central University for Nationalities, Wuhan 430074, P.R. China.
Rui QinCollege of Life Sciences, South-central University for Nationalities, Wuhan 430074, P.R. China.
Yi WangCollege of Life Sciences, South-central University for Nationalities, Wuhan 430074, P.R. China.
South Central University for Nationalities · CNChina University of Geosciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The split G-quadruplex DNAzyme has emerged as a valuable tool for visual DNA detection. Here, we successfully integrated colorimetric split G-quadruplex DNAzyme assay with nucleic acid sequence-based amplification to generate a novel detection approach, allowing visual and rapid detection for the RNA of Shimen and HCLV strains of Classic Swine Fever Virus (CSFV). CSFV is a RNA virus that causes a highly contagious disease in domestic pigs and wild boar. With this method, we were able to detect as little as 10 copies/ml of CSF viral RNA within 3 h in serum samples taken from the field. No interference was encountered in the amplification and detection of Classic Swine Fever Virus in the presence of non-target RNA or DNA. Moreover, Shimen and HCLV strains of Classic Swine Fever Virus could be easily differentiated using the NASBA-DNAzyme system. These findings indicate the NASBA-DNAzyme system is a rapid and practical technique for detecting and discriminating CSFV strains and may be applied to the detection of other RNA viruses.

Indexed as

G-QuadruplexesAnimalsCell LineClassical Swine FeverClassical Swine Fever VirusNucleic Acid Amplification TechniquesRNA, ViralSwineRNA, Viral

Identifiers

PMID28287135
PMCPMC5347003
OpenAlexW2597398401

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.