Evidence map›Paper›PMID 28286726›Full record

ArticleFEBS open bio2017

Multiple expression cassette exchange via TP901-1, R4, and Bxb1 integrase systems on a mouse artificial chromosome.

Kosuke Tomimatsu, Kenji Kokura, Tadashi Nishida, Yuki Yoshimura, Yasuhiro Kazuki, Masashi Narita, Mitsuo Oshimura, Tetsuya Ohbayashi

Open access · goldAbstract read
In one paragraph

Article in FEBS open bio, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.3field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Kosuke TomimatsuResearch Center for Bioscience and Technology Tottori University Yonago Japan; Japan Society for the Promotion of Science Tokyo Japan.
Kenji KokuraChromosome Engineering Research Center Tottori University Yonago Japan; Division of Human Genome Science Department of Molecular and Cellular Biology School of Life Sciences Faculty of Medicine Tottori University Yonago Japan.
Tadashi NishidaResearch Center for Bioscience and Technology Tottori University Yonago Japan.
Yuki YoshimuraDepartment of Biomedical Science Institute of Regenerative Medicine and Biofunction Graduate School of Medical Sciences Tottori University Yonago Japan; Central Institute for Experimental Animals Kawasaki Japan.
Yasuhiro KazukiChromosome Engineering Research Center Tottori University Yonago Japan; Department of Biomedical Science Institute of Regenerative Medicine and Biofunction Graduate School of Medical Sciences Tottori University Yonago Japan.
Masashi NaritaCancer Research UK Cambridge Institute Li Ka Shing Centre University of Cambridge UK.
Mitsuo OshimuraChromosome Engineering Research Center Tottori University Yonago Japan; Department of Biomedical Science Institute of Regenerative Medicine and Biofunction Graduate School of Medical Sciences Tottori University Yonago Japan.
Tetsuya OhbayashiResearch Center for Bioscience and Technology Tottori University Yonago Japan.
Tottori University · JPCancer Research UK · GBJapan Society for the Promotion of Science · JP

Funding

Cancer Research UK 15890Cancer Research UK 24453
6 · The paper itself

Abstract

The site-specific excision of a target DNA sequence for genetic knockout or lineage tracing is a powerful tool for investigating biological systems. Currently, site-specific recombinases (SSRs), such as Cre or Flp recombination target cassettes, have been successfully excised or inverted by a single SSR to regulate transgene expression. However, the use of a single SSR might restrict the complex control of gene expression. This study investigated the potential for expanding the multiple regulation of transgenes using three different integrase systems (TP901-1, R4, and Bxb1). We designed three excision cassettes that expressed luciferase, where the luciferase expression could be exchanged to a fluorescent protein by site-specific recombination. Individual cassettes that could be regulated independently by a different integrase were connected in tandem and inserted into a mouse artificial chromosome (MAC) vector in Chinese hamster ovary cells. The transient expression of an integrase caused the targeted luciferase activity to be lost and fluorescence was activated. Additionally, the integrase system enabled the specific excision of targeted DNA sequences without cross-reaction with the other recombination targets. These results suggest that the combined use of these integrase systems in a defined locus on a MAC vector permits the multiple regulation of transgene expression and might contribute to genomic or cell engineering.

Indexed as

fluorescent proteinintegraselineage‐tracing reporterluciferasemouse artificial chromosome

Identifiers

PMID28286726
PMCPMC5337897
OpenAlexW2557770280

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.