Evidence map›Paper›PMID 28283737›Full record

ArticleMammalian genome : official journal of the International Mammalian Genome Society2017

Mild reproductive impact of a Y chromosome deletion on a C57BL/6J substrain.

Megan M MacBride, Adam Navis, Amar Dasari, Ana V Perez

Open access · hybridAbstract read
In one paragraph

Article in Mammalian genome : official journal of the International Mammalian Genome Society, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.1field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Sequence and Structural Diversity of Mouse Y Chromosomes.Molecular biology and evolution · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Megan M MacBrideTaconic Biosciences, One Hudson City Centre, Hudson, NY, 12534, USA.
Adam NavisTaconic Biosciences, One Hudson City Centre, Hudson, NY, 12534, USA.
Amar DasariTaconic Biosciences, One Hudson City Centre, Hudson, NY, 12534, USA.
Ana V PerezTaconic Biosciences, One Hudson City Centre, Hudson, NY, 12534, USA. ana.perez@taconic.com.
Taconic (United States) · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A recently reported deletion of about 40 Mb in length between 6.12/6.57 and 46.73/47.31 Mb on the Y chromosome long arm of the C57BL/6JBomTac inbred strain made us closely examine the strain's breeding history and reproductive characteristics. We verified that the two copies of Rbm31y that are present inside the putative deletion were indeed deleted. This inbred strain presents an expected litter size for a C57BL/6 substrain. In vitro fertilization (IVF) efficiency and breeding efficiencies are comparable to those of the C57BL/6NTac substrain; however, the male/female sex ratio in the C57BL/6JBomTac is mildly skewed towards females. There is an increase in the percentage of sperm shape abnormalities found in C57BL/6JBomTac (35%) versus C57BL/6NTac (11%). The most frequent type of sperm abnormality observed is bent heads (19%). Additionally, there is deregulation of several transcripts expressed in the testes. We determined that this mutation arose in the C57BL/6JBomTac Foundation Colony in 2008, and it was completely fixed in the colony by 2009.

Indexed as

AnimalsChromosome DeletionChromosomes, Human, YFemaleFertilization in VitroInfertility, MaleMaleMiceMice, Inbred C57BLReproductionSex Chromosome AberrationsSex Chromosome Disorders of Sex DevelopmentSpermatozoaTestisY Chromosome

Identifiers

PMID28283737
PMCPMC5442250
OpenAlexW2592819334

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.