Evidence map›Paper›PMID 28283059›Full record

ArticleCell2017

Stress-Triggered Phase Separation Is an Adaptive, Evolutionarily Tuned Response.

Joshua A Riback, Christopher D Katanski, Jamie L Kear-Scott, Evgeny V Pilipenko, Alexandra E Rojek, Tobin R Sosnick, D Allan Drummond

Open access · bronzeAbstract read
In one paragraph

Article in Cell, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 513 papers.

0numbers the graph read from it
0cells of the map it votes in
513citing papers in PubMed
33.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

513 citing papers in PubMed, 960 citations in OpenAlex.

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  19. Fusion protein condensate formation via coiled-coil domains.Protein science : a publication of the Protein Society · 2026
    Article
  20. Article

453 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Joshua A RibackGraduate Program in the Biophysical Sciences, University of Chicago, Chicago, IL 60673, USA.
Christopher D KatanskiDepartment of Biochemistry & Molecular Biology, University of Chicago, Chicago, IL 60673, USA.
Jamie L Kear-ScottDepartment of Biochemistry & Molecular Biology, University of Chicago, Chicago, IL 60673, USA.
Evgeny V PilipenkoDepartment of Biochemistry & Molecular Biology, University of Chicago, Chicago, IL 60673, USA.
Alexandra E RojekDepartment of Biochemistry & Molecular Biology, University of Chicago, Chicago, IL 60673, USA.
Tobin R SosnickDepartment of Biochemistry & Molecular Biology, University of Chicago, Chicago, IL 60673, USA; Institute for Biophysical Dynamics, University of Chicago, Chicago, IL 60673, USA; Institute of Molecular Engineering, University of Chicago, Chicago, IL 60673, USA.
D Allan DrummondDepartment of Biochemistry & Molecular Biology, University of Chicago, Chicago, IL 60673, USA; Department of Human Genetics, University of Chicago, Chicago, IL 60673, USA. Electronic address: dadrummond@uchicago.edu.
University of Chicago · US

Funding

Molecular And Cellular Biology Training ProgramT32GM007183 · NIGMS · UNIVERSITY OF CHICAGO · PI GLICK, BENJAMIN S, RICE, PHOEBE A · 1985 to 2021
$23.9M
Time resolved SAXS studies on the RP2/Arl3 complex pp.484-485P41GM103622 · NIGMS · ILLINOIS INSTITUTE OF TECHNOLOGY · PI IRVING, THOMAS C · 2012 to 2020
$11.9M
Kinetic studies of protein foldingR01GM055694 · NIGMS · UNIVERSITY OF CHICAGO · PI SOSNICK, TOBIN R · 2001 to 2022
$7.6M
Graduate Program in Biophysical Sciences at the University of Chicago - Renewal 0T32EB009412 · NIBIB · UNIVERSITY OF CHICAGO · PI ENGEL, GREGORY S, SOSNICK, TOBIN R · 2009 to 2023
$4.9M
Interactions Regulating Translation and Protein Biogenesis in VivoU54GM105816 · NIGMS · UNIVERSITY OF NOTRE DAME · PI BUSKIRK, ALLEN ROWDON, CLARK, PATRICIA LOUISE · 2013 to 2017
$3.7M
Advanced Pixel Array Detector for Time-Resolved SAXS and Fiber DiffractionS10OD018090 · OD · ILLINOIS INSTITUTE OF TECHNOLOGY · PI IRVING, THOMAS C · 2014 to 2014
$529k
FOLDING OF AN ALPHA-HELICAL COILED COILR29GM055694 · NIGMS · UNIVERSITY OF CHICAGO · PI SOSNICK, TOBIN R · 1996 to 2000
$107k
NIBIB NIH HHS T32 EB009412NIGMS NIH HHS P41 GM103622NIGMS NIH HHS R01 GM055694NIGMS NIH HHS R29 GM055694NIGMS NIH HHS T32 GM007183NIGMS NIH HHS U54 GM105816NIH HHS S10 OD018090
6 · The paper itself

Abstract

In eukaryotic cells, diverse stresses trigger coalescence of RNA-binding proteins into stress granules. In vitro, stress-granule-associated proteins can demix to form liquids, hydrogels, and other assemblies lacking fixed stoichiometry. Observing these phenomena has generally required conditions far removed from physiological stresses. We show that poly(A)-binding protein (Pab1 in yeast), a defining marker of stress granules, phase separates and forms hydrogels in vitro upon exposure to physiological stress conditions. Other RNA-binding proteins depend upon low-complexity regions (LCRs) or RNA for phase separation, whereas Pab1's LCR is not required for demixing, and RNA inhibits it. Based on unique evolutionary patterns, we create LCR mutations, which systematically tune its biophysical properties and Pab1 phase separation in vitro and in vivo. Mutations that impede phase separation reduce organism fitness during prolonged stress. Poly(A)-binding protein thus acts as a physiological stress sensor, exploiting phase separation to precisely mark stress onset, a broadly generalizable mechanism.

Indexed as

Amino Acid SequenceCytoplasmic GranulesHot TemperatureHydrogen-Ion ConcentrationHydrophobic and Hydrophilic InteractionsIntrinsically Disordered ProteinsMutagenesisPoly(A)-Binding ProteinsProlineProtein DomainsRibonucleasesSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSequence AlignmentStress, PhysiologicalIntrinsically Disordered Proteinspab1 protein, S cerevisiaePoly(A)-Binding ProteinsProlineRibonucleasesSaccharomyces cerevisiae Proteinsenergy depletionheat shockintrinsically disordered proteinlow-complexity regionmembraneless organellepHpoly(A)-binding proteinquinary structureRNA-binding proteinstress granules

Identifiers

PMID28283059
PMCPMC5401687
OpenAlexW2593862218

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.