Evidence map›Paper›PMID 28282376›Full record

ArticlePLoS genetics2017

The transjugation machinery of Thermus thermophilus: Identification of TdtA, an ATPase involved in DNA donation.

Alba Blesa, Ignacio Baquedano, Nieves G Quintáns, Carlos P Mata, José R Castón, José Berenguer

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
4.0field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 34 citations in OpenAlex.

  1. Article
  2. Autotrophic growth ofFrontiers in microbiology · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Alba BlesaCentro de Biología Molecular Severo Ochoa, Universidad Autónoma de Madrid -Consejo Superior de Investigaciones Científicas, Madrid, Spain.
Ignacio BaquedanoCentro de Biología Molecular Severo Ochoa, Universidad Autónoma de Madrid -Consejo Superior de Investigaciones Científicas, Madrid, Spain.ORCID 0000-0002-5782-9448
Nieves G QuintánsCentro de Biología Molecular Severo Ochoa, Universidad Autónoma de Madrid -Consejo Superior de Investigaciones Científicas, Madrid, Spain.ORCID 0000-0003-4565-7148
Carlos P MataDepartment of Structure of Macromolecules, Centro Nacional de Biotecnología (CNB-CSIC), Cantoblanco, Madrid, Spain.
José R CastónDepartment of Structure of Macromolecules, Centro Nacional de Biotecnología (CNB-CSIC), Cantoblanco, Madrid, Spain.ORCID 0000-0003-2350-9048
José BerenguerCentro de Biología Molecular Severo Ochoa, Universidad Autónoma de Madrid -Consejo Superior de Investigaciones Científicas, Madrid, Spain.ORCID 0000-0002-9689-6272
Consejo Superior de Investigaciones Científicas · ESCentro Nacional de Biotecnología · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In addition to natural competence, some Thermus thermophilus strains show a high rate of DNA transfer via direct cell-to-cell contact. The process is bidirectional and follows a two-step model where the donor cell actively pushes out DNA and the recipient cell employs the natural competence system to take up the DNA, in a hybrid transformation-dependent conjugation process (transjugation). While the DNA uptake machinery is well known as in other bacterial species that undergo transformation, the pushing step of transjugation remains to be characterized. Here we have searched for hypothetical DNA translocases putatively involved in the pushing step of transjugation. Among candidates encoded by T. thermophilus HB27, the TdtA protein was found to be required for DNA pushing but not for DNA pulling during transjugation, without affecting other cellular processes. Purified TdtA shows ATPase activity and oligomerizes as hexamers with a central opening that can accommodate double-stranded DNA. The tdtA gene was found to belong to a mobile 14 kbp-long DNA element inserted within the 3' end of a tRNA gene, flanked by 47 bp direct repeats. The insertion also encoded a homolog of bacteriophage site-specific recombinases and actively self-excised from the chromosome at high frequency to form an apparently non-replicative circular form. The insertion also encoded a type II restriction endonuclease and a NurA-like nuclease, whose activities were required for efficient transjugation. All these data support that TdtA belongs to a new type of Integrative and Conjugative Element which promotes the generalized and efficient transfer of genetic traits that could facilitate its co-selection among bacterial populations.

Indexed as

Adenosine TriphosphatasesBacterial ProteinsComputational BiologyDNA, BacterialDNA Restriction EnzymesEscherichia coliMicroscopy, ElectronMutationPhenotypeRecombinant ProteinsThermus thermophilusTransformation, BacterialAdenosine TriphosphatasesBacterial ProteinsDNA, BacterialDNA Restriction EnzymesRecombinant Proteins

Identifiers

PMID28282376
PMCPMC5365140
OpenAlexW2593567750

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.