Evidence map›Paper›PMID 28280580›Full record

ArticleRoyal Society open science2017

Organization of biogeochemical nitrogen pathways with switch-like adjustment in fluctuating soil redox conditions.

Sanjay Lamba, Soumen Bera, Mubasher Rashid, Alexander B Medvinsky, Gui-Quan Sun, Claudia Acquisti, Amit Chakraborty, Bai-Lian Li

Abstract read
In one paragraph

Article in Royal Society open science, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Sanjay LambaSchool of Mathematics, Statistics and Computational Sciences , Central University of Rajasthan , Bandarsindri, Ajmer , India.
Soumen BeraSchool of Mathematics, Statistics and Computational Sciences , Central University of Rajasthan , Bandarsindri, Ajmer , India.
Mubasher RashidSchool of Mathematics, Statistics and Computational Sciences , Central University of Rajasthan , Bandarsindri, Ajmer , India.
Alexander B MedvinskyInstitute of Theoretical and Experimental Biophysics , Pushchino 142290 , Russia.
Gui-Quan SunDepartment of Mathematics , Shanxi University , Taiyuan , People's Republic of China.ORCID 0000-0002-1831-1603
Claudia AcquistiInstitute for Evolution and Biodiversity , WWU Muenster , Germany.
Amit ChakrabortySchool of Mathematics, Statistics and Computational Sciences, Central University of Rajasthan, Bandarsindri, Ajmer, India; Ecological Complexity and Modeling Laboratory, University of California, Riverside, CA 92521-0124, USA.ORCID 0000-0002-2068-4011
Bai-Lian LiEcological Complexity and Modeling Laboratory , University of California , Riverside, CA 92521-0124 , USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nitrogen is cycled throughout ecosystems by a suite of biogeochemical processes. The high complexity of the nitrogen cycle resides in an intricate interplay between reversible biochemical pathways alternatively and specifically activated in response to diverse environmental cues. Despite aggressive research, how the fundamental nitrogen biochemical processes are assembled and maintained in fluctuating soil redox conditions remains elusive. Here, we address this question using a kinetic modelling approach coupled with dynamical systems theory and microbial genomics. We show that alternative biochemical pathways play a key role in keeping nitrogen conversion and conservation properties invariant in fluctuating environments. Our results indicate that the biochemical network holds inherent adaptive capacity to stabilize ammonium and nitrate availability, and that the bistability in the formation of ammonium is linked to the transient upregulation of the

Indexed as

biochemical networkbiogeochemistryecosystemsnitrogen cycleself-regulation

Identifiers

PMID28280580
PMCPMC5319346

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.