Evidence map›Paper›PMID 28280572›Full record

ArticleRoyal Society open science2017

Thioflavin T as an amyloid dye: fibril quantification, optimal concentration and effect on aggregation.

Christine Xue, Tiffany Yuwen Lin, Dennis Chang, Zhefeng Guo

Open access · goldAbstract read
In one paragraph

Article in Royal Society open science, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 326 papers.

0numbers the graph read from it
0cells of the map it votes in
326citing papers in PubMed
28.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

326 citing papers in PubMed, 767 citations in OpenAlex.

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266 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Christine XueDepartment of Neurology, Brain Research Institute, Molecular Biology Institute , University of California , Los Angeles, CA 90095 , USA.
Tiffany Yuwen LinDepartment of Neurology, Brain Research Institute, Molecular Biology Institute , University of California , Los Angeles, CA 90095 , USA.
Dennis ChangDepartment of Neurology, Brain Research Institute, Molecular Biology Institute , University of California , Los Angeles, CA 90095 , USA.
Zhefeng GuoDepartment of Neurology, Brain Research Institute, Molecular Biology Institute , University of California , Los Angeles, CA 90095 , USA.ORCID 0000-0003-1992-7255
Google (United States) · US

Funding

Structural biology of yeast prions.R01GM110448 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI GUO, ZHEFENG · 2014 to 2018
$1.5M
NIGMS NIH HHS R01 GM110448
6 · The paper itself

Abstract

Formation of amyloid fibrils underlies a wide range of human disorders, including Alzheimer's and prion diseases. The amyloid fibrils can be readily detected thanks to thioflavin T (ThT), a small molecule that gives strong fluorescence upon binding to amyloids. Using the amyloid fibrils of Aβ40 and Aβ42 involved in Alzheimer's disease, and of yeast prion protein Ure2, here we study three aspects of ThT binding to amyloids: quantification of amyloid fibrils using ThT, the optimal ThT concentration for monitoring amyloid formation and the effect of ThT on aggregation kinetics. We show that ThT fluorescence correlates linearly with amyloid concentration over ThT concentrations ranging from 0.2 to 500 µM. At a given amyloid concentration, the plot of ThT fluorescence versus ThT concentration exhibits a bell-shaped curve. The maximal fluorescence signal depends mostly on the total ThT concentration, rather than amyloid to ThT ratio. For the three proteins investigated, the maximal fluorescence is observed at ThT concentrations of 20-50 µM. Aggregation kinetics experiments in the presence of different ThT concentrations show that ThT has little effect on aggregation at concentrations of 20 µM or lower. ThT at concentrations of 50 µM or more could affect the shape of the aggregation curves, but this effect is protein-dependent and not universal.

Indexed as

Alzheimer's diseaseAβfibrillization kineticsyeast prion

Identifiers

PMID28280572
PMCPMC5319338
OpenAlexW2568381790

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.