Evidence map›Paper›PMID 28279976›Full record

ArticleThe EMBO journal2017

Regulation of hypoxia responses by flavin adenine dinucleotide-dependent modulation of HIF-1α protein stability.

Suk-Jin Yang, Young Soo Park, Jung Hee Cho, Byul Moon, Hyun-Jung An, Ju Yeon Lee, Zhi Xie, Yuli Wang, David Pocalyko, Dong Chul Lee and 7 more

Open access · greenAbstract read
In one paragraph

Article in The EMBO journal, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
2.9field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 55 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Role of NADCellular and molecular neurobiology · 2023
    Review
  11. Article
  12. Article
  13. Breath of Fresh Air: Toward Unraveling the Molecular Underpinnings of Sleep Apnea.American journal of respiratory and critical care medicine · 2022
    Article
  14. Targeting lysine-specific demethylase 1A inhibits renal epithelial-mesenchymal transition and attenuates renal fibrosis.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2022
    Article
  15. Article
  16. Review
  17. Review
  18. Article
  19. Review
  20. Epigenetic crosstalk between hypoxia and tumor driven by HIF regulation.Journal of experimental & clinical cancer research : CR · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 4 institutions in 2 countries.

Suk-Jin YangBiotherapeutics Translational Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, South Korea.
Young Soo ParkBiotherapeutics Translational Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, South Korea.
Jung Hee ChoPersonalized Genomic Medicine Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, South Korea.
Byul MoonBiotherapeutics Translational Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, South Korea.
Hyun-Jung AnPersonalized Genomic Medicine Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, South Korea.
Ju Yeon LeeBiomedical Omics Group, Korea Basic Science Institute, Cheongju, South Korea.
Zhi XiePfizer Global Research and Development, San Diego, CA, USA.
Yuli WangPfizer Global Research and Development, San Diego, CA, USA.
David PocalykoPfizer Global Research and Development, San Diego, CA, USA.
Dong Chul LeeBiotherapeutics Translational Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, South Korea.
Hyun Ahm SohnBiotherapeutics Translational Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, South Korea.
Minho KangPersonalized Genomic Medicine Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, South Korea.ORCID 0000-0003-0069-026X
Jin Young KimBiomedical Omics Group, Korea Basic Science Institute, Cheongju, South Korea.
Eunhee KimDepartment of Bioscience and Biotechnology, Chungnam National University, Daejeon, South Korea.
Kyung Chan ParkDepartment of Functional Genomics, University of Science and Technology, Daejeon, South Korea kpark@kribb.re.kr jungaekim@kribb.re.kr yeomyi@kribb.re.kr.ORCID 0000-0002-7730-9466
Jung-Ae KimDepartment of Functional Genomics, University of Science and Technology, Daejeon, South Korea kpark@kribb.re.kr jungaekim@kribb.re.kr yeomyi@kribb.re.kr.ORCID 0000-0001-5485-4843
Young Il YeomBiotherapeutics Translational Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, South Korea kpark@kribb.re.kr jungaekim@kribb.re.kr yeomyi@kribb.re.kr.ORCID 0000-0003-4279-805X
Korea Research Institute of Bioscience and Biotechnology · KRKorea Basic Science Institute · KRPfizer (United States) · USChungnam National University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Oxygen deprivation induces a range of cellular adaptive responses that enable to drive cancer progression. Here, we report that lysine-specific demethylase 1 (LSD1) upregulates hypoxia responses by demethylating RACK1 protein, a component of hypoxia-inducible factor (HIF) ubiquitination machinery, and consequently suppressing the oxygen-independent degradation of HIF-1α. This ability of LSD1 is attenuated during prolonged hypoxia, with a decrease in the cellular level of flavin adenine dinucleotide (FAD), a metabolic cofactor of LSD1, causing HIF-1α downregulation in later stages of hypoxia. Exogenously provided FAD restores HIF-1α stability, indicating a rate-limiting role for FAD in LSD1-mediated HIF-1α regulation. Transcriptomic analyses of patient tissues show that the HIF-1 signature is highly correlated with the expression of LSD1 target genes as well as the enzymes of FAD biosynthetic pathway in triple-negative breast cancers, reflecting the significance of FAD-dependent LSD1 activity in cancer progression. Together, our findings provide a new insight into HIF-mediated hypoxia response regulation by coupling the FAD dependence of LSD1 activity to the regulation of HIF-1α stability.

Indexed as

Gene Expression RegulationUbiquitinationCell HypoxiaFlavin-Adenine DinucleotideHistone DemethylasesHumansHuman Umbilical Vein Endothelial CellsHypoxia-Inducible Factor 1, alpha SubunitProtein StabilityFlavin-Adenine DinucleotideHIF1A protein, humanHistone DemethylasesHypoxia-Inducible Factor 1, alpha SubunitKDM1A protein, humancancerFAD biosynthesisHIF‐1hypoxiaLSD1

Identifiers

PMID28279976
PMCPMC5391145
OpenAlexW2591735127

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.