Evidence map›Paper›PMID 28278053›Full record

ArticleCell cycle (Georgetown, Tex.)2017

Differential perturbation of the interstitial cystitis-associated genes of bladder and urethra in rat model.

Bo-Hwa Choi, Sungyong You, Chang-Shin Park, Eun-Ho Cho, Taeeun D Park, Sungsoo Kim, Young-Ju Kim, Tack Lee, Jayoung Kim

Open access · bronzeAbstract read
In one paragraph

Article in Cell cycle (Georgetown, Tex.), 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed, 1 pooled it
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 1 synthesis or guideline pooled it, 3 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Bo-Hwa Choia Department of Pharmacology , Hypoxia-Related Disease Research Center, Inha Research Institute for Medical Sciences, Inha University College of Medicine , Incheon , South Korea.
Sungyong Youb Departments of Surgery and Biomedical Sciences , Cedars-Sinai Medical Center , Los Angeles , CA , USA.
Chang-Shin Parka Department of Pharmacology , Hypoxia-Related Disease Research Center, Inha Research Institute for Medical Sciences, Inha University College of Medicine , Incheon , South Korea.
Eun-Ho Chob Departments of Surgery and Biomedical Sciences , Cedars-Sinai Medical Center , Los Angeles , CA , USA.
Taeeun D Parkb Departments of Surgery and Biomedical Sciences , Cedars-Sinai Medical Center , Los Angeles , CA , USA.
Sungsoo Kime Department of Biochemistry and Molecular Biology , Medical Research Center for Bioreaction to Reactive Oxygen Species and Biomedical Science Institute, School of Medicine, Kyung Hee University , Seoul , South Korea.
Young-Ju Kima Department of Pharmacology , Hypoxia-Related Disease Research Center, Inha Research Institute for Medical Sciences, Inha University College of Medicine , Incheon , South Korea.
Tack Leef Department of Urology , Inha University College of Medicine , Incheon , South Korea.
Jayoung Kimb Departments of Surgery and Biomedical Sciences , Cedars-Sinai Medical Center , Los Angeles , CA , USA.
Inha University · KRCedars-Sinai Medical Center · USKyung Hee University · KRUniversity of California, Los Angeles · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Interstitial cystitis (IC) is a chronic bladder dysfunction characterized as urinary frequency, urgency, nocturia, and pelvic pain. The changes in urethra may wind up with the bladder changes in structure and functions, however, the functions of the urethra in IC remains elusive. The aim of this study was to understand the perturbed gene expression in urethra, compared with urinary bladder, associated with the defected urodynamics. Using female IC mimic rats, a comprehensive RNA-sequencing combined with a bioinformatics analysis was performed and revealed that IC-specific genes in bladder or urethra. Gene ontology analysis suggested that the cell adhesion or extracellular matrix regulation, intracellular signaling cascade, cardiac muscle tissue development, and second messenger-mediated signaling might be the most enriched cellular processes in IC context. Further study of the effects of these bladder- or urethra-specific genes may suggest underlying mechanism of lower urinary tract function and novel therapeutic strategies against IC.

Indexed as

AnimalsBody WeightCystitis, InterstitialDisease Models, AnimalFemaleGene Expression ProfilingGene Expression RegulationOrgan SizeRats, Sprague-DawleySequence Analysis, RNAUrethraUrinary Bladderbladdergene expressioninterstitial cystitisrat modelRNA-Sequencingurethra

Identifiers

PMID28278053
PMCPMC5405721
OpenAlexW2590394108

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.