Evidence map›Paper›PMID 28277220›Full record

ArticleEuro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin2017

Multi-laboratory validation study of multilocus variable-number tandem repeat analysis (MLVA) for Salmonella enterica serovar Enteritidis, 2015.

Tansy Peters, Sophie Bertrand, Jonas T Björkman, Lin T Brandal, Derek J Brown, Tímea Erdõsi, Max Heck, Salha Ibrahem, Karin Johansson, Christian Kornschober and 12 more

Open access · diamondAbstract read
In one paragraph

Article in Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
3.4field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Genomic Comparison ofPathogens (Basel, Switzerland) · 2020
    Article
  3. Increasing incubation periods during a prolonged monophasicEuro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin · 2019
    Article
  4. A Modular Bayesian Salmonella Source Attribution Model for Sparse Data.Risk analysis : an official publication of the Society for Risk Analysis · 2019
    Article
  5. Genetic diversity and delineation ofEuro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin · 2019
    Observational
  6. Article
  7. Article
  8. External quality assessment for molecular typing of Salmonella 2013-2015: performance of the European national public health reference laboratories.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 14 institutions in 14 countries.

Tansy PetersPublic Health England, London, United Kingdom.
Sophie BertrandScientific Institute of Public Health, Brussels, Belgium.
Jonas T BjörkmanStatens Serum Institut, Copenhagen, Denmark.
Lin T BrandalNorwegian Institute of Public Health, Oslo, Norway.
Derek J BrownScottish Microbiology Reference Laboratories, Glasgow, United Kingdom.
Tímea ErdõsiNational Center for Epidemiology, Budapest, Hungary.
Max HeckNational Institute for Public Health and the Environment, Bilthoven, The Netherlands.
Salha IbrahemNational Institute for Health and Welfare, Helsinki, Finland.
Karin JohanssonEuropean Centre for Disease Prevention and Control (ECDC), Solna, Sweden.
Christian KornschoberAustrian Agency for Health and Food Safety, Graz, Austria.
Saara M KotilaEuropean Centre for Disease Prevention and Control (ECDC), Solna, Sweden.
Simon Le HelloInstitut Pasteur, Paris, France.
Taru LienemannNational Institute for Health and Welfare, Helsinki, Finland.
Wesley MattheusScientific Institute of Public Health, Brussels, Belgium.
Eva Møller NielsenStatens Serum Institut, Copenhagen, Denmark.
Catherine RagimbeauLaboratoire National de Santé, Dudelange, Luxembourg.
Jillian RumorePublic Health Agency of Canada, Winnipeg, Canada.
Ashley SabolCenters for Disease Control and Prevention, Atlanta, USA.
Mia TorpdahlStatens Serum Institut, Copenhagen, Denmark.
Eija TreesCenters for Disease Control and Prevention, Atlanta, USA.
Alma TuohyUniversity Hospital Galway, Galway, Ireland.
Elizabeth de PinnaPublic Health England, London, United Kingdom.
Statens Serum Institut · DKCenters for Disease Control and Prevention · USEuropean Centre for Disease Prevention and Control · SEFinnish Institute for Health and Welfare · FIInstitut Scientifique de Santé Publique · BEPublic Health England · GBAustrian Agency for Health and Food Safety · ATInstitut Pasteur · FRLaboratoire National de Santé · LUNational Center for Epidemiology · HUNational Institute for Public Health and the Environment · NLNorwegian Institute of Public Health · NOPublic Health Agency of Canada · CAUniversity Hospital Galway · IE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Multilocus variable-number tandem repeat analysis (MLVA) is a rapid and reproducible typing method that is an important tool for investigation, as well as detection, of national and multinational outbreaks of a range of food-borne pathogens. Salmonella enterica serovar Enteritidis is the most common Salmonella serovar associated with human salmonellosis in the European Union/European Economic Area and North America. Fourteen laboratories from 13 countries in Europe and North America participated in a validation study for MLVA of S. Enteritidis targeting five loci. Following normalisation of fragment sizes using a set of reference strains, a blinded set of 24 strains with known allele sizes was analysed by each participant. The S. Enteritidis 5-loci MLVA protocol was shown to produce internationally comparable results as more than 90% of the participants reported less than 5% discrepant MLVA profiles. All 14 participating laboratories performed well, even those where experience with this typing method was limited. The raw fragment length data were consistent throughout, and the inter-laboratory validation helped to standardise the conversion of raw data to repeat numbers with at least two countries updating their internal procedures. However, differences in assigned MLVA profiles remain between well-established protocols and should be taken into account when exchanging data.

Indexed as

ChinaDisease OutbreaksEpidemiologic StudiesEuropeHumansLaboratoriesMinisatellite RepeatsMolecular TypingMultilocus Sequence TypingPhylogenyPredictive Value of TestsPublic Health SurveillanceReproducibility of ResultsSalmonella enteritidisSalmonella Food PoisoningSalmonella Infectionsfood-borne infectionslaboratorylaboratory surveillanceSalmonellatyping

Identifiers

PMID28277220
PMCPMC5356433
OpenAlexW2592096152

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.