Evidence map›Paper›PMID 28275738›Full record

ArticleScience advances2017

Long-range allosteric signaling in red light-regulated diguanylyl cyclases.

Geoffrey Gourinchas, Stefan Etzl, Christoph Göbl, Uršula Vide, Tobias Madl, Andreas Winkler

Open access · goldAbstract read
In one paragraph

Article in Science advances, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 73 papers.

0numbers the graph read from it
0cells of the map it votes in
73citing papers in PubMed
21.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

73 citing papers in PubMed, 127 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Structures of Myxobacterial Phytochrome Revealed by Cryo-EM.Methods in molecular biology (Clifton, N.J.) · 2026
    Article
  6. Article
  7. Strategies for Coexpression of Bilin-Producing Enzymes in Escherichia coli.Methods in molecular biology (Clifton, N.J.) · 2026
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

13 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Geoffrey GourinchasInstitute of Biochemistry, Graz University of Technology, Petersgasse 12/II, 8010 Graz, Austria.
Stefan EtzlInstitute of Biochemistry, Graz University of Technology, Petersgasse 12/II, 8010 Graz, Austria.
Christoph GöblCenter for Integrated Protein Science Munich, Technische Universität München, Department of Chemistry, Lichtenbergstraße 4, 85748 Garching, Germany.; Institute of Structural Biology, Helmholtz Zentrum München, Ingolstädter Landstraße 1, 85764 Neuherberg, Germany.
Uršula VideInstitute of Biochemistry, Graz University of Technology, Petersgasse 12/II, 8010 Graz, Austria.
Tobias MadlCenter for Integrated Protein Science Munich, Technische Universität München, Department of Chemistry, Lichtenbergstraße 4, 85748 Garching, Germany.; Institute of Structural Biology, Helmholtz Zentrum München, Ingolstädter Landstraße 1, 85764 Neuherberg, Germany.; Institute of Molecular Biology and Biochemistry, Medical University of Graz, Harrachgasse 21/III, 8010 Graz, Austria.ORCID 0000-0002-9725-5231
Andreas WinklerInstitute of Biochemistry, Graz University of Technology, Petersgasse 12/II, 8010 Graz, Austria.
Graz University of Technology · ATCenter for Integrated Protein Science Munich · DE

Funding

Austrian Science Fund FWF P 27124Austrian Science Fund FWF P 28854
6 · The paper itself

Abstract

Nature has evolved an astonishingly modular architecture of covalently linked protein domains with diverse functionalities to enable complex cellular networks that are critical for cell survival. The coupling of sensory modules with enzymatic effectors allows direct allosteric regulation of cellular signaling molecules in response to diverse stimuli. We present molecular details of red light-sensing bacteriophytochromes linked to cyclic dimeric guanosine monophosphate-producing diguanylyl cyclases. Elucidation of the first crystal structure of a full-length phytochrome with its enzymatic effector, in combination with the characterization of light-induced changes in conformational dynamics, reveals how allosteric light regulation is fine-tuned by the architecture and composition of the coiled-coil sensor-effector linker and also the central helical spine. We anticipate that consideration of molecular principles of sensor-effector coupling, going beyond the length of the characteristic linker, and the appreciation of dynamically driven allostery will open up new directions for the design of novel red light-regulated optogenetic tools.

Indexed as

Signal TransductionAllosteric RegulationAlteromonadaceaeBacterial ProteinsCrystallography, X-RayGuanylate CyclaseLightProtein DomainsBacterial ProteinsGuanylate Cyclaseallosteryc-di-GMPdiguanylate cyclasedynamicseffectorHDX-MSphytochromeSAXSsensor

Identifiers

PMID28275738
PMCPMC5336353
OpenAlexW2592471304

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.