Evidence map›Paper›PMID 28270264›Full record

ArticleMicrobiology (Reading, England)2017

Suppressor analysis of eepR mutant defects reveals coordinate regulation of secondary metabolites and serralysin biosynthesis by EepR and HexS.

Robert M Q Shanks, Nicholas A Stella, Roni M Lahr, Marissa A Aston, Kimberly M Brothers, Jake D Callaghan, Cihad Sigindere, Xinyu Liu

Abstract read
In one paragraph

Article in Microbiology (Reading, England), 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.0field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Increased Proteolytic Activity ofPolish journal of microbiology · 2024
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Enhanced Prodigiosin Production inApplied and environmental microbiology · 2021
    Article
  8. Transcription Factor EepR Is Required forAntibiotics (Basel, Switzerland) · 2021
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Thermoregulation of Prodigiosin Biosynthesis byPolish journal of microbiology · 2019
    Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Robert M Q ShanksCharles T. Campbell Ophthalmic Microbiology Laboratory, Department of Ophthalmology, University of Pittsburgh Medical School, Pittsburgh, PA, USA.
Nicholas A StellaCharles T. Campbell Ophthalmic Microbiology Laboratory, Department of Ophthalmology, University of Pittsburgh Medical School, Pittsburgh, PA, USA.
Roni M LahrPresent address: Department of Biological Sciences, University of Pittsburgh, Pittsburgh, PA, USA.
Marissa A AstonPresent address: Children's Hospital of Philadelphia, Philadelphia, PA, USA.
Kimberly M BrothersCharles T. Campbell Ophthalmic Microbiology Laboratory, Department of Ophthalmology, University of Pittsburgh Medical School, Pittsburgh, PA, USA.
Jake D CallaghanCharles T. Campbell Ophthalmic Microbiology Laboratory, Department of Ophthalmology, University of Pittsburgh Medical School, Pittsburgh, PA, USA.
Cihad SigindereDepartment of Chemistry, University of Pittsburgh, Pittsburgh, PA, USA.
Xinyu LiuDepartment of Chemistry, University of Pittsburgh, Pittsburgh, PA, USA.
University of Pittsburgh · US

Funding

Virus Production and Manipulation of Protein/Gene Expression ModuleP30EY008098 · NEI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI Marlene Behrmann · 1989 to 2026
$17.8M
Novel virulence and exoenzyme regulatorsR01AI085570 · NIAID · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI SHANKS, ROBERT M · 2010 to 2014
$1.8M
Impediment of corneal cell migration by a bacterial factorF32EY024785 · NEI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI BROTHERS, KIMBERLY M · 2015 to 2016
$112k
NEI NIH HHS F32 EY024785NEI NIH HHS P30 EY008098NIAID NIH HHS R01 AI085570
6 · The paper itself

Abstract

The EepR transcription factor positively regulates secondary metabolites and tissue-damaging metalloproteases. To gain insight into mechanisms by which EepR regulates pigment and co-regulated factors, genetic suppressor analysis was performed. Suppressor mutations that restored pigment to the non-pigmented ∆eepR mutant mapped to the hexS ORF. Mutation of hexS also restored haemolysis, swarming motility and protease production to the eepR mutant. HexS is a known direct and negative regulator of secondary metabolites in Serratia marcescens and is a LysR family regulator and an orthologue of LrhA. Here, we demonstrate that HexS directly controls eepR and the serralysin gene prtS. EepR was shown to directly regulate eepR expression but indirectly regulate hexS expression. Together, these data indicate that EepR and HexS oppose each other in controlling stationary phase-associated molecules and enzymes.

Indexed as

Bacterial ProteinsDepsipeptidesDNA Transposable ElementsElectrophoretic Mobility Shift AssayEscherichia coliFlagellaGene Expression Regulation, BacterialGenes, RegulatorMass SpectrometryMetalloendopeptidasesProdigiosinSecondary MetabolismSerratia marcescensTranscription FactorsBacterial ProteinsDepsipeptidesDNA Transposable ElementsLysR protein, BacteriaMetalloendopeptidasesProdigiosinserralysinserratamolideTranscription Factors

Identifiers

PMID28270264
PMCPMC5775897
OpenAlexW2571278302

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.