Evidence map›Paper›PMID 28266535›Full record

ArticleScientific reports2017

G196 epitope tag system: a novel monoclonal antibody, G196, recognizes the small, soluble peptide DLVPR with high affinity.

Kasumi Tatsumi, Gyosuke Sakashita, Yuko Nariai, Kosuke Okazaki, Hiroaki Kato, Eiji Obayashi, Hisashi Yoshida, Kanako Sugiyama, Sam-Yong Park, Joji Sekine and 1 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 18 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Kasumi TatsumiDepartment of Biochemistry, Shimane University School of Medicine, Izumo 693-8501, Japan.
Gyosuke SakashitaDepartment of Biochemistry, Shimane University School of Medicine, Izumo 693-8501, Japan.
Yuko NariaiDepartment of Biochemistry, Shimane University School of Medicine, Izumo 693-8501, Japan.
Kosuke OkazakiDepartment of Biochemistry, Shimane University School of Medicine, Izumo 693-8501, Japan.
Hiroaki KatoDepartment of Biochemistry, Shimane University School of Medicine, Izumo 693-8501, Japan.
Eiji ObayashiDepartment of Biochemistry, Shimane University School of Medicine, Izumo 693-8501, Japan.
Hisashi YoshidaDrug Design Group, Kanagawa Academy of Science and Technology, Kawasaki, Kanagawa, 213-0012, Japan.
Kanako SugiyamaDrug Design Group, Kanagawa Academy of Science and Technology, Kawasaki, Kanagawa, 213-0012, Japan.
Sam-Yong ParkDrug Design Group, Kanagawa Academy of Science and Technology, Kawasaki, Kanagawa, 213-0012, Japan.
Joji SekineDepartment of Oral and Maxillofacial Surgery Shimane University School of Medicine, Izumo 693-8501, Japan.
Takeshi UranoDepartment of Biochemistry, Shimane University School of Medicine, Izumo 693-8501, Japan.
Shimane University · JPKanagawa Academy of Science and Technology · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The recognition specificity of monoclonal antibodies (mAbs) has made mAbs among the most frequently used tools in both basic science research and in clinical diagnosis and therapies. Precise determination of the epitope allows the development of epitope tag systems to be used with recombinant proteins for various purposes. Here we describe a new family of tag derived from the epitope recognized by a highly specific mAb G196. The minimal epitope was identified as the five amino acid sequence Asp-Leu-Val-Pro-Arg. Permutation analysis was used to characterize the binding requirements of mAb G196, and the variable regions of the mAb G196 were identified and structurally analyzed by X-ray crystallography. Isothermal titration calorimetry revealed the high affinity (K

Indexed as

Amino Acid SequenceAnimalsAntibodies, MonoclonalAntibody AffinityAntibody SpecificityBinding SitesCloning, MolecularCrystallography, X-RayEpitope MappingEpitopesEscherichia coliGene ExpressionGenetic VectorsHeLa CellsHumansMiceAntibodies, MonoclonalEpitopesPeptidesRecombinant Proteins

Identifiers

PMID28266535
PMCPMC5339894
OpenAlexW2593628408

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.