Evidence map›Paper›PMID 28265120›Full record

ArticleMolecular psychiatry2018

A genome-wide gene-by-trauma interaction study of alcohol misuse in two independent cohorts identifies PRKG1 as a risk locus.

R Polimanti, J Kaufman, H Zhao, H R Kranzler, R J Ursano, R C Kessler, J Gelernter, M B Stein

Open access · greenAbstract read
In one paragraph

Article in Molecular psychiatry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed, 3 pooled it
5.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 3 syntheses or guidelines pooled it, 56 citations in OpenAlex.

  1. Pooled it
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  4. Trial
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  13. TheJournal of neurogenetics · 2021
    Article
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  16. Genes and environments, development and time.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  17. Self-regulation and theProceedings of the National Academy of Sciences of the United States of America · 2019
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 7 institutions in 1 country.

R PolimantiDepartment of Psychiatry, Yale School of Medicine and VA CT Healthcare Center, West Haven, CT, USA.
J KaufmanCenter for Child and Family Traumatic Stress, Kennedy Krieger Institute, Baltimore, MD, USA.
H ZhaoDepartment of Biostatistics, Yale University School of Public Health, New Haven, CT, USA.
H R KranzlerDepartment of Psychiatry, University of Pennsylvania School of Medicine and VISN4 MIRECC, Crescenz VAMC, Philadelphia, PA, USA.
R J UrsanoCenter for the Study of Traumatic Stress, Department of Psychiatry, Uniformed Services University of the Health Sciences, Bethesda, MD, USA.
R C KesslerDepartment of Health Care Policy, Harvard Medical School, Boston MA, USA.
J GelernterDepartment of Psychiatry, Yale School of Medicine and VA CT Healthcare Center, West Haven, CT, USA.
M B SteinDepartment of Psychiatry, University of California, San Diego, La Jolla, CA, USA.
Yale University · USHarvard University · USJohns Hopkins University · USMental Illness Research, Education and Clinical Centers · USUniformed Services University of the Health Sciences · USVA Connecticut Healthcare System · USVA San Diego Healthcare System · US

Funding

Yale Clinical and Translational Science Award (U Component)UL1TR001863 · NCATS · YALE UNIVERSITY · PI John H. Krystal, LUCILA OHNO-MACHADO · 2016 to 2026
$102.9M
Modifiable Risk and Protective Factors for Suicidal Behaviors in the US ArmyU01MH087981 · NIMH · HENRY M. JACKSON FDN FOR THE ADV MIL/MED · PI STEIN, MURRAY B., URSANO, ROBERT J. · 2009 to 2013
$65.0M
Translational Technologies CoreP50AA012870 · NIAAA · YALE UNIVERSITY · PI John H. Krystal · 2001 to 2026
$43.7M
Sex-specific analysis of opioid dependence GWAS and beyondR01DA012690 · NIDA · YALE UNIVERSITY · PI GELERNTER, JOEL · 2000 to 2017
$14.0M
GENETICS OF COCAINE DEPENDENCER01DA012849 · NIDA · YALE UNIVERSITY · PI GELERNTER, JOEL · 1999 to 2010
$11.5M
Linkage Disequilibrium Studies of Alcohol DependenceR01AA011330 · NIAAA · YALE UNIVERSITY · PI GELERNTER, JOEL · 1997 to 2013
$6.4M
Genomewide Association Study of Cocaine Dependence in two PopulationsRC2DA028909 · NIDA · YALE UNIVERSITY · PI GELERNTER, JOEL · 2009 to 2010
$4.2M
Genetics of Cocaine DependenceR01DA018432 · NIDA · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI KRANZLER, HENRY RICHARD · 2006 to 2010
$3.5M
Genetics of Alcohol Dependence in African-AmericansR01AA017535 · NIAAA · YALE UNIVERSITY · PI GELERNTER, JOEL · 2009 to 2013
$3.0M
A GEWIS Study of Smoking, Hazardous Drinking, and Other Health Risk BehaviorsR21AA024404 · NIAAA · YALE UNIVERSITY · PI KAUFMAN, JOAN R., STEIN, MURRAY B. · 2015 to 2016
$398k
NCATS NIH HHS UL1 TR001863NIAAA NIH HHS P50 AA012870NIAAA NIH HHS R01 AA011330NIAAA NIH HHS R01 AA017535NIAAA NIH HHS R21 AA024404NIDA NIH HHS R01 DA012690NIDA NIH HHS R01 DA012849NIDA NIH HHS R01 DA018432NIDA NIH HHS RC2 DA028909NIMH NIH HHS U01 MH087981
6 · The paper itself

Abstract

Traumatic life experiences are associated with alcohol use problems, an association that is likely to be moderated by genetic predisposition. To understand these interactions, we conducted a gene-by-environment genome-wide interaction study (GEWIS) of alcohol use problems in two independent samples, the Army STARRS (STARRS, N=16 361) and the Yale-Penn (N=8084) cohorts. Because the two cohorts were assessed using different instruments, we derived separate dimensional alcohol misuse scales and applied a proxy-phenotype study design. In African-American subjects, we identified an interaction of PRKG1 rs1729578 with trauma exposure in the STARRS cohort and replicated its interaction with trauma exposure in the Yale-Penn cohort (discovery-replication meta-analysis: z=5.64, P=1.69 × 10

Indexed as

Gene-Environment InteractionLife Change EventsAdolescentAdultAlcoholismCohort StudiesCyclic GMP-Dependent Protein Kinase Type IFemaleGenome-Wide Association StudyGenotypeHumansMaleMiddle AgedMutationRisk FactorsYoung AdultCyclic GMP-Dependent Protein Kinase Type IPRKG1 protein, human

Identifiers

PMID28265120
PMCPMC5589475
OpenAlexW2591951179

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.