Evidence map›Paper›PMID 28263986›Full record

ArticlePLoS genetics2017

TDRD6 mediates early steps of spliceosome maturation in primary spermatocytes.

Müge Akpınar, Mathias Lesche, Grigorios Fanourgakis, Jun Fu, Konstantinos Anastassiadis, Andreas Dahl, Rolf Jessberger

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 21 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Review
  5. Protein Arginine Methyltransferase 5 FunctionsFrontiers in cell and developmental biology · 2021
    Article
  6. Review
  7. Development of an AAV-Based MicroRNA Gene Therapy to Treat Machado-Joseph Disease.Molecular therapy. Methods & clinical development · 2019
    Article
  8. Cellular consequences of arginine methylation.Cellular and molecular life sciences : CMLS · 2019
    Review
  9. Review
  10. Article
  11. Article
  12. Article
  13. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Müge AkpınarInstitute of Physiological Chemistry, Medical Faculty Carl Gustav Carus, Technische Universität Dresden, Dresden, Germany.
Mathias LescheDeep Sequencing Group SFB 655, Biotechnology Center, Technische Universität Dresden, Dresden, Germany.ORCID 0000-0002-3274-7163
Grigorios FanourgakisInstitute of Physiological Chemistry, Medical Faculty Carl Gustav Carus, Technische Universität Dresden, Dresden, Germany.
Jun FuStem Cell Engineering, Biotechnology Center, Technische Universität Dresden, Dresden, Germany.
Konstantinos AnastassiadisStem Cell Engineering, Biotechnology Center, Technische Universität Dresden, Dresden, Germany.
Andreas DahlDeep Sequencing Group SFB 655, Biotechnology Center, Technische Universität Dresden, Dresden, Germany.
Rolf JessbergerInstitute of Physiological Chemistry, Medical Faculty Carl Gustav Carus, Technische Universität Dresden, Dresden, Germany.ORCID 0000-0002-2972-2192
Technische Universität Dresden · DEUniversity Hospital Carl Gustav Carus · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Tudor containing protein 6 (TDRD6) is a male germ line-specific protein essential for chromatoid body (ChB) structure, elongated spermatid development and male fertility. Here we show that in meiotic prophase I spermatocytes TDRD6 interacts with the key protein arginine methyl transferase PRMT5, which supports splicing. TDRD6 also associates with spliceosomal core protein SmB in the absence of RNA and in an arginine methylation dependent manner. In Tdrd6-/- diplotene spermatocytes PRMT5 association with SmB and arginine dimethylation of SmB are much reduced. TDRD6 deficiency impairs the assembly of spliceosomes, which feature 3.5-fold increased levels of U5 snRNPs. In the nucleus, these deficiencies in spliceosome maturation correlate with decreased numbers of SMN-positive bodies and Cajal bodies involved in nuclear snRNP maturation. Transcriptome analysis of TDRD6-deficient diplotene spermatocytes revealed high numbers of splicing defects such as aberrant usage of intron and exons as well as aberrant representation of splice junctions. Together, this study demonstrates a novel function of TDRD6 in spliceosome maturation and mRNA splicing in prophase I spermatocytes.

Indexed as

AnimalsArginineChromatidsCoiled BodiesDeoxyadenosinesDNA MethylationExonsFatty Acids, UnsaturatedIntronsMaleMethylationMiceMice, TransgenicMicroscopy, FluorescenceProtein-Arginine N-MethyltransferasesProtein Domains5'-methylthioadenosineArginineDeoxyadenosinesFatty Acids, Unsaturatedleptomycin BPrmt5 protein, mouseProtein-Arginine N-MethyltransferasesRibonucleoproteinsRibonucleoprotein, U5 Small NuclearRNA, MessengerTDRD6 protein, mouseThionucleosides

Identifiers

PMID28263986
PMCPMC5358835
OpenAlexW2594536077

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.