ArticleScientific reports2017
Population genomics of an endemic Mediterranean fish: differentiation by fine scale dispersal and adaptation.
Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers, 1 of them a synthesis that pooled it.
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Who cites it
39 citing papers in PubMed, 1 synthesis or guideline pooled it.
- Impact of life history traits on gene flow: A multispecies systematic review across oceanographic barriers in the Mediterranean Sea.PloS one · 2017Pooled it
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- Mitochondrial, nuclear and morphological differentiation in the swimming crab Liocarcinus depurator along the Atlantic-Mediterranean transition.Scientific reports · 2024Article
- Exceptional population genomic homogeneity in the black brittle star Ophiocomina nigra (Ophiuroidea, Echinodermata) along the Atlantic-Mediterranean coast.Scientific reports · 2023Article
- Genomic assessment reveals signal of adaptive selection in populations of the Spotted rose snapperPeerJ · 2023Article
- Genomic basis for early-life mortality in sharpsnout seabream.Scientific reports · 2022Article
- Genetic and particle modelling approaches to assessing population connectivity in a deep sea lobster.Scientific reports · 2022Article
- Genome-wide species delimitation analyses of a silverside fish species complex in central Mexico indicate taxonomic over-splitting.BMC ecology and evolution · 2022Article
- Speciation genomics and the role of depth in the divergence of rockfishes (Ecology and evolution · 2022Article
- MHC class I-α population differentiation in a commercial fish, the European sea bass (Dicentrarchus labrax).Animal genetics · 2022Article
- Low-coverage reduced representation sequencing reveals subtle within-island genetic structure in Aldabra giant tortoises.Ecology and evolution · 2022Article
- The sardine run in southeastern Africa is a mass migration into an ecological trap.Science advances · 2021Article
- Genetic differentiation and signatures of local adaptation revealed by RADseq for a highly dispersive mud crabEcology and evolution · 2021Article
- Genome-wide analysis clarifies the population genetic structure of wild gilthead sea bream (Sparus aurata).PloS one · 2021Article
- Genome wide analysis reveals genetic divergence between Goldsinny wrasse populations.BMC genetics · 2020Article
- Distribution modelling of an introduced species: do adaptive genetic markers affect potential range?Proceedings. Biological sciences · 2020Article
- Skim-Sequencing Based Genotyping Reveals Genetic Divergence of the Wild and Domesticated Population of Black Tiger Shrimp (Biology · 2020Article
- Genetic analysis redraws the management boundaries for the European sprat.Evolutionary applications · 2020Article
- Individual-based population genomics reveal different drivers of adaptation in sympatric fish.Scientific reports · 2020Article
Corrections and comments
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Authors and funding
7 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The assessment of the genetic structuring of biodiversity is crucial for management and conservation. For species with large effective population sizes a low number of markers may fail to identify population structure. A solution of this shortcoming can be high-throughput sequencing that allows genotyping thousands of markers on a genome-wide approach while facilitating the detection of genetic structuring shaped by selection. We used Genotyping-by-Sequencing (GBS) on 176 individuals of the endemic East Atlantic peacock wrasse (Symphodus tinca), from 6 locations in the Adriatic and Ionian seas. We obtained a total of 4,155 polymorphic SNPs and we observed two strong barriers to gene flow. The first one differentiated Tremiti Islands, in the northwest, from all the other locations while the second one separated east and south-west localities. Outlier SNPs potentially under positive selection and neutral SNPs both showed similar patterns of structuring, although finer scale differentiation was unveiled with outlier loci. Our results reflect the complexity of population genetic structure and demonstrate that both habitat fragmentation and positive selection are on play. This complexity should be considered in biodiversity assessments of different taxa, including non-model yet ecologically relevant organisms.
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