Evidence map›Paper›PMID 28262675›Full record

ArticleNature communications2017

Genomic characterisation of Eμ-Myc mouse lymphomas identifies Bcor as a Myc co-operative tumour-suppressor gene.

Marcus Lefebure, Richard W Tothill, Elizabeth Kruse, Edwin D Hawkins, Jake Shortt, Geoffrey M Matthews, Gareth P Gregory, Benjamin P Martin, Madison J Kelly, Izabela Todorovski and 16 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
1.8field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 54 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

26 authors at 8 institutions in 2 countries.

Marcus LefebureThe Peter MacCallum Cancer Centre, Melbourne, Victoria 3000, Australia.
Richard W TothillThe Peter MacCallum Cancer Centre, Melbourne, Victoria 3000, Australia.
Elizabeth KruseThe Peter MacCallum Cancer Centre, Melbourne, Victoria 3000, Australia.
Edwin D HawkinsThe Walter Eliza Hall Institute of Medical Research, Parkville, Victoria 3052, Australia.
Jake ShorttThe Peter MacCallum Cancer Centre, Melbourne, Victoria 3000, Australia.
Geoffrey M MatthewsDana Farber Cancer Institute, Boston, Massachusetts 02115, USA.
Gareth P GregoryThe Peter MacCallum Cancer Centre, Melbourne, Victoria 3000, Australia.
Benjamin P MartinThe Peter MacCallum Cancer Centre, Melbourne, Victoria 3000, Australia.
Madison J KellyThe Peter MacCallum Cancer Centre, Melbourne, Victoria 3000, Australia.
Izabela TodorovskiThe Peter MacCallum Cancer Centre, Melbourne, Victoria 3000, Australia.
Maria A DoyleThe Peter MacCallum Cancer Centre, Melbourne, Victoria 3000, Australia.
Richard LupatThe Peter MacCallum Cancer Centre, Melbourne, Victoria 3000, Australia.
Jason LiThe Peter MacCallum Cancer Centre, Melbourne, Victoria 3000, Australia.
Jan SchroederThe Walter Eliza Hall Institute of Medical Research, Parkville, Victoria 3052, Australia.
Meaghan WallVictorian Cancer Cytogenetics Service, St Vincent's Hospital, Fitzroy, Victoria 3065, Australia.
Stuart CraigThe Peter MacCallum Cancer Centre, Melbourne, Victoria 3000, Australia.
Gretchen PoortingaThe Peter MacCallum Cancer Centre, Melbourne, Victoria 3000, Australia.
Don CameronThe Peter MacCallum Cancer Centre, Melbourne, Victoria 3000, Australia.
Megan BywaterThe Peter MacCallum Cancer Centre, Melbourne, Victoria 3000, Australia.
Lev KatsThe Peter MacCallum Cancer Centre, Melbourne, Victoria 3000, Australia.
Micah D GearhartDevelopmental Biology Center, Masonic Cancer Center, and Department of Genetics, Cell Biology, and Development, University of Minnesota, Minneapolis, Minnesota 55455, USA.
Vivian J BardwellDevelopmental Biology Center, Masonic Cancer Center, and Department of Genetics, Cell Biology, and Development, University of Minnesota, Minneapolis, Minnesota 55455, USA.
Ross A DickinsAustralian Centre for Blood Diseases, Monash University, AMREP Building, Commercial Road, The Alfred Hospital, Melbourne, Victoria 3004, Australia.
Ross D HannanThe Peter MacCallum Cancer Centre, Melbourne, Victoria 3000, Australia.
Anthony T PapenfussThe Peter MacCallum Cancer Centre, Melbourne, Victoria 3000, Australia.
Ricky W JohnstoneThe Peter MacCallum Cancer Centre, Melbourne, Victoria 3000, Australia.
Peter MacCallum Cancer Centre · AUUniversity of Minnesota · USWalter and Eliza Hall Institute of Medical Research · AUAustralian National University · AUDana-Farber Cancer Institute · USSt Vincent's Hospital · AUThe Alfred Hospital · AUUniversity of Melbourne · AU

Funding

Molecular Basis of Action of the Putative Oncogene BCL6R01CA071540 · NCI · UNIVERSITY OF MINNESOTA TWIN CITIES · PI BARDWELL, VIVIAN J · 2002 to 2012
$3.0M
NCI NIH HHS R01 CA071540
6 · The paper itself

Abstract

The Eμ-Myc mouse is an extensively used model of MYC driven malignancy; however to date there has only been partial characterization of MYC co-operative mutations leading to spontaneous lymphomagenesis. Here we sequence spontaneously arising Eμ-Myc lymphomas to define transgene architecture, somatic mutations, and structural alterations. We identify frequent disruptive mutations in the PRC1-like component and BCL6-corepressor gene Bcor. Moreover, we find unexpected concomitant multigenic lesions involving Cdkn2a loss and other cancer genes including Nras, Kras and Bcor. These findings challenge the assumed two-hit model of Eμ-Myc lymphoma and demonstrate a functional in vivo role for Bcor in suppressing tumorigenesis.

Indexed as

Gene Expression Regulation, NeoplasticMutationAllelesAnimalsB-LymphocytesCRISPR-Cas SystemsCyclin-Dependent Kinase Inhibitor p16Disease Models, AnimalGene EditingGene FrequencyJanus Kinase 2Lymphoma, B-CellMiceMice, TransgenicProto-Oncogene Proteins c-mycProto-Oncogene Proteins p21(ras)Bcor protein, mouseCdkn2a protein, mouseCyclin-Dependent Kinase Inhibitor p16Hras protein, mouseJak2 protein, mouseJanus Kinase 2Myc protein, mouseProto-Oncogene Proteins c-mycProto-Oncogene Proteins p21(ras)Repressor ProteinsSTAT5 Transcription FactorTrp53 protein, mouseTumor Suppressor Protein p53

Identifiers

PMID28262675
PMCPMC5343491
OpenAlexW2594234949

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.