Evidence map›Paper›PMID 28261023›Full record

ArticleCEUR workshop proceedings2013

Human Development Domain of the Ontology of Craniofacial Development and Malformation.

Jose Lv Mejino, Ravensara S Travillian, Timothy C Cox, Linda G Shapiro, James F Brinkley

Abstract read
In one paragraph

Article in CEUR workshop proceedings, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Jose Lv MejinoStructural Informatics Group, Department of Biological Structure, University of Washington, Seattle, WA USA.
Ravensara S TravillianStructural Informatics Group, Department of Biological Structure, University of Washington, Seattle, WA USA; Department of Biomedical Informatics and Medical Education, University of Washington, Seattle, WA USA.
Timothy C CoxDivision of Craniofacial Medicine, Department of Pediatrics, University of Washington, Seattle, WA USA; Center for Tissue and Cell Sciences, Seattle Children's Research Institute; Seattle, WA USA; Department of Anatomy & Developmental Biology, Monash University, Clayton, Victoria, Australia.
Linda G ShapiroStructural Informatics Group, Department of Biological Structure, University of Washington, Seattle, WA USA; Department of Biomedical Informatics and Medical Education, University of Washington, Seattle, WA USA; Department of Computer Science & Engineering, University of Washington, Seattle, WA USA.
James F BrinkleyStructural Informatics Group, Department of Biological Structure, University of Washington, Seattle, WA USA; Department of Biomedical Informatics and Medical Education, University of Washington, Seattle, WA USA.

Funding

Technology Project: Shape-Based Retrieval of 3D Craniofacial DataU01DE020050 · NIDCR · UNIVERSITY OF WASHINGTON · PI SHAPIRO, LINDA · 2009 to 2013
$3.8M
The Ontology of Craniofacial Development and MalformationU01DE024417 · NIDCR · UNIVERSITY OF WASHINGTON · PI BRINKLEY, JAMES F · 2014 to 2018
$2.0M
NIDCR NIH HHS U01 DE020050NIDCR NIH HHS U01 DE024417
6 · The paper itself

Abstract

In this paper we describe an ontological scheme for representing anatomical entities undergoing morphological transformation and changes in phenotype during prenatal development. This is a proposed component of the Anatomical Transformation Abstraction (ATA) of the Foundational Model of Anatomy (FMA) Ontology that was created to provide an ontological framework for capturing knowledge about human development from the zygote to postnatal life. It is designed to initially describe the structural properties of the anatomical entities that participate in human development and then enhance their description with developmental properties, such as temporal attributes and developmental processes. This approach facilitates the correlation and integration of the classical but static representation of embryology with the evolving novel concepts of developmental biology, which primarily deals with the experimental data on the mechanisms of embryogenesis and organogenesis. This is important for describing and understanding the underlying processes involved in structural malformations. In this study we focused on the development of the lips and the palate in conjunction with our work on the pathogenesis and classification of cleft lip and palate (CL/P) in the FaceBase program. Our aim here is to create the Craniofacial Human Development Ontology (CHDO) to support the Ontology of Craniofacial Development and Malformation (OCDM), which provides the infrastructure for integrating multiple and disparate craniofacial data generated by FaceBase researchers.

Identifiers

PMID28261023
PMCPMC5331931

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.