Evidence map›Paper›PMID 28258182›Full record

ArticleGenetics2017

Annealing of Complementary DNA Sequences During Double-Strand Break Repair in

Julie Korda Holsclaw, Jeff Sekelsky

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Improving one-step scarless genome editing inBiology methods & protocols · 2022
    Article
  3. Review
  4. The Role ofGenes · 2021
    Article
  5. Article
  6. TheG3 (Bethesda, Md.) · 2020
    Article
  7. Article
  8. Loss ofGenetics · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Julie Korda HolsclawCurriculum in Genetics and Molecular Biology, University of North Carolina, Chapel Hill, North Carolina 27599.
Jeff SekelskyCurriculum in Genetics and Molecular Biology, University of North Carolina, Chapel Hill, North Carolina 27599 sekelsky@unc.edu.ORCID 0000-0002-4424-677X
University of North Carolina at Chapel Hill · US

Funding

Mechanisms of Meiotic and Mitotic RecombinationR35GM118127 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI JEFF J. SEKELSKY · 2016 to 2026
$6.0M
NRSA IN GENETICST32GM007092 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI SEKELSKY, JEFF J. · 1985 to 2019
$5.9M
Meiotic Recombination in DrosophilaR01GM061252 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI SEKELSKY, JEFF J. · 2000 to 2015
$4.1M
Determining the role of Blm and Marcal1 helicases in replication fork remodeling and progressionF31GM113550 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI HOLSCLAW, JULIE · 2015 to 2016
$62k
NIGMS NIH HHS F31 GM113550NIGMS NIH HHS R01 GM061252NIGMS NIH HHS R35 GM118127NIGMS NIH HHS T32 GM007092
6 · The paper itself

Abstract

DNA double-strand breaks (DSBs) pose a serious threat to genomic integrity. If unrepaired, they can lead to chromosome fragmentation and cell death. If repaired incorrectly, they can cause mutations and chromosome rearrangements. DSBs are repaired using end-joining or homology-directed repair strategies, with the predominant form of homology-directed repair being synthesis-dependent strand annealing (SDSA). SDSA is the first defense against genomic rearrangements and information loss during DSB repair, making it a vital component of cell health and an attractive target for chemotherapeutic development. SDSA has also been proposed to be the primary mechanism for integration of large insertions during genome editing with CRISPR/Cas9. Despite the central role for SDSA in genome stability, little is known about the defining step: annealing. We hypothesized that annealing during SDSA is performed by the annealing helicase SMARCAL1, which can anneal RPA-coated single DNA strands during replication-associated DNA damage repair. We used unique genetic tools in

Indexed as

DNA Breaks, Double-StrandedAdenosine TriphosphateAnimalsCRISPR-Cas SystemsDNA-Binding ProteinsDNA, ComplementaryDNA DamageDNA End-Joining RepairDrosophila melanogasterGene EditingGenomic InstabilitySMARCB1 ProteinAdenosine TriphosphateDNA-Binding ProteinsDNA, ComplementarySMARCB1 ProteinDrosophilaDSB repairhomologous recombinationSDSASMARCAL1

Identifiers

PMID28258182
PMCPMC5419489
OpenAlexW2593578311

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.