Evidence map›Paper›PMID 28257510›Full record

ArticlePloS one2017

The genetic diversity of chicken breeds from Jiangxi, assessed with BCDO2 and the complete mitochondrial DNA D-loop region.

Yu-Shi Gao, Xiao-Xu Jia, Xiu-Jun Tang, Yan-Feng Fan, Jun-Xian Lu, Sheng-Hai Huang, Meng-Jun Tang

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
5.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Genetic diversity ofMitochondrial DNA. Part B, Resources · 2021
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Mutation ofFrontiers in cell and developmental biology · 2020
    Article
  11. Article
4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Yu-Shi GaoJiangsu institute of Poultry Science, Yangzhou, China.
Xiao-Xu JiaJiangsu institute of Poultry Science, Yangzhou, China.ORCID http://orcid.org/0000-0003-4803-9599
Xiu-Jun TangJiangsu institute of Poultry Science, Yangzhou, China.
Yan-Feng FanJiangsu institute of Poultry Science, Yangzhou, China.
Jun-Xian LuJiangsu institute of Poultry Science, Yangzhou, China.
Sheng-Hai HuangJiangsu institute of Poultry Science, Yangzhou, China.
Meng-Jun TangJiangsu institute of Poultry Science, Yangzhou, China.
Poultry Research Institute · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Jiangxi Province of China has numerous native domestic chicken breeds, including some black skin breeds. The genetic diversity of Jiangxi native chickens is largely unknown, and specifically, the genetic contribution of the grey junglefowl to black skin chickens is not well understood. To address these questions, the complete D-loop region of the mitochondrial DNA (mtDNA) and beta-carotene dioxygenase 2(BCDO2)gene was sequenced in a total of 209 chickens representing seven Jiangxi native breeds. Thirty-one polymorphic sites were identified across the complete mtDNA D-loop region sequence. Twenty-three haplotypes were observed in the seven breeds, which belonged to four distinct mitochondrial clades (A, B, C and E). Clade A and B were dominant in the chickens with a frequency of approximately 67.9%. There were five SNPs that defined two haplotypes, W and Y in BCDO2. Four breeds had one haplotype and three breeds had two. We conclude that Jiangxi native chicken breeds have relatively low genetic diversity and likely share four common maternal lineages from two different maternal ancestors of junglefowl. Furthermore, some Jiangxi chicken populations may have been mixed with chickens with exotic lineage. Further research should be established to protect these domestic chicken resources.

Indexed as

Genetic VariationPhylogenyAnimalsAnimals, DomesticAvian Proteinsbeta Carotenebeta-Carotene 15,15'-MonooxygenaseBreedingChickensChinaDNA, MitochondrialHaplotypesMitochondriaPolymorphism, Single NucleotideSequence Analysis, DNAAvian Proteinsbeta Carotenebeta-Carotene 15,15'-MonooxygenaseDNA, Mitochondrial

Identifiers

PMID28257510
PMCPMC5336267
OpenAlexW2594169773

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.