ArticleScientific reports2017
High-density genetic map and identification of QTLs for responses to temperature and salinity stresses in the model brown alga Ectocarpus.
Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.
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Who cites it
12 citing papers in PubMed, 50 citations in OpenAlex.
- Origin and evolutionary trajectories of brown algal sex chromosomes.Nature ecology & evolution · 2025Article
- Genome editing in macroalgae: advances and challenges.Frontiers in genome editing · 2024Review
- Article
- The baseless mutant links protein phosphatase 2A with basal cell identity in the brown alga Ectocarpus.Development (Cambridge, England) · 2023Article
- instaGRAAL: chromosome-level quality scaffolding of genomes using a proximity ligation-based scaffolder.Genome biology · 2020Article
- Presence of Exogenous Sulfate Is Mandatory for Tip Growth in the Brown AlgaFrontiers in plant science · 2020Article
- Review
- A key role for sex chromosomes in the regulation of parthenogenesis in the brown alga Ectocarpus.PLoS genetics · 2019Article
- Peptimapper: proteogenomics workflow for the expert annotation of eukaryotic genomes.BMC genomics · 2019Article
- Multi-year linkage and association mapping confirm the high number of genomic regions involved in oilseed rape quantitative resistance to blackleg.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2018Article
- Article
- DISTAG/TBCCd1 Is Required for Basal Cell Fate Determination inThe Plant cell · 2017Article
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Authors and funding
10 authors at 1 institution in 2 countries.
Funding
Abstract
Deciphering the genetic architecture of adaptation of brown algae to environmental stresses such as temperature and salinity is of evolutionary as well as of practical interest. The filamentous brown alga Ectocarpus sp. is a model for the brown algae and its genome has been sequenced. As sessile organisms, brown algae need to be capable of resisting the various abiotic stressors that act in the intertidal zone (e.g. osmotic pressure, temperature, salinity, UV radiation) and previous studies have shown that an important proportion of the expressed genes is regulated in response to hyposaline, hypersaline or oxidative stress conditions. Using the double digest RAD sequencing method, we constructed a dense genetic map with 3,588 SNP markers and identified 39 QTLs for growth-related traits and their plasticity under different temperature and salinity conditions (tolerance to high temperature and low salinity). GO enrichment tests within QTL intervals highlighted membrane transport processes such as ion transporters. Our study represents a significant step towards deciphering the genetic basis of adaptation of Ectocarpus sp. to stress conditions and provides a substantial resource to the increasing list of tools generated for the species.
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