Evidence map›Paper›PMID 28256420›Full record

ArticleEpidemics2018

Using data-driven agent-based models for forecasting emerging infectious diseases.

Srinivasan Venkatramanan, Bryan Lewis, Jiangzhuo Chen, Dave Higdon, Anil Vullikanti, Madhav Marathe

Abstract read
In one paragraph

Article in Epidemics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 58 papers.

0numbers the graph read from it
0cells of the map it votes in
58citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

58 citing papers in PubMed.

  1. Review
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  4. Improving outbreak forecasts through model augmentation.Proceedings of the National Academy of Sciences of the United States of America · 2025
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  18. The stochasticCommunications in nonlinear science & numerical simulation · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Srinivasan VenkatramananNetwork Dynamics and Simulation Science Laboratory, Biocomplexity Institute of Virginia Tech, United States. Electronic address: vsriniv@vbi.vt.edu.
Bryan LewisNetwork Dynamics and Simulation Science Laboratory, Biocomplexity Institute of Virginia Tech, United States. Electronic address: blewis@vbi.vt.edu.
Jiangzhuo ChenNetwork Dynamics and Simulation Science Laboratory, Biocomplexity Institute of Virginia Tech, United States. Electronic address: chenj@vbi.vt.edu.
Dave HigdonSocial and Decision Analytics Laboratory, Biocomplexity Institute of Virginia Tech, United States; Department of Statistics, Virginia Tech, United States. Electronic address: dhigdon@vbi.vt.edu.
Anil VullikantiNetwork Dynamics and Simulation Science Laboratory, Biocomplexity Institute of Virginia Tech, United States; Department of Computer Science, Virginia Tech, United States. Electronic address: akumar@vbi.vt.edu.
Madhav MaratheNetwork Dynamics and Simulation Science Laboratory, Biocomplexity Institute of Virginia Tech, United States; Department of Computer Science, Virginia Tech, United States. Electronic address: mmarathe@vbi.vt.edu.

Funding

Synthetic Information Systems for Better Informing Public Health PolicymakersU01GM070694 · NIGMS · VIRGINIA POLYTECHNIC INST AND ST UNIV · PI EUBANK, STEPHEN G, MARATHE, MADHAV VISHNU · 2004 to 2016
$8.6M
Systems Analysis of Social Pathways of Epidemics to Reduce Health DisparitiesR01GM109718 · NIGMS · VIRGINIA POLYTECHNIC INST AND ST UNIV · PI MARATHE, ACHLA, VULLIKANTI, ANIL · 2014 to 2022
$3.6M
NIGMS NIH HHS U01 GM070694
6 · The paper itself

Abstract

Producing timely, well-informed and reliable forecasts for an ongoing epidemic of an emerging infectious disease is a huge challenge. Epidemiologists and policy makers have to deal with poor data quality, limited understanding of the disease dynamics, rapidly changing social environment and the uncertainty on effects of various interventions in place. Under this setting, detailed computational models provide a comprehensive framework for integrating diverse data sources into a well-defined model of disease dynamics and social behavior, potentially leading to better understanding and actions. In this paper, we describe one such agent-based model framework developed for forecasting the 2014-2015 Ebola epidemic in Liberia, and subsequently used during the Ebola forecasting challenge. We describe the various components of the model, the calibration process and summarize the forecast performance across scenarios of the challenge. We conclude by highlighting how such a data-driven approach can be refined and adapted for future epidemics, and share the lessons learned over the course of the challenge.

Indexed as

Models, StatisticalBayes TheoremEpidemicsForecastingHemorrhagic Fever, EbolaHumansLiberiaAgent-based modelsBayesian calibrationEbolaEmerging infectious diseasesSimulation optimization

Identifiers

PMID28256420
PMCPMC5568513

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.