Evidence map›Paper›PMID 28253868›Full record

ArticleMalaria journal2017

Selections, frameshift mutations, and copy number variation detected on the surf

Jesse N Gitaka, Mika Takeda, Masatsugu Kimura, Zulkarnain Md Idris, Chim W Chan, James Kongere, Kazuhide Yahata, Francis W Muregi, Yoshio Ichinose, Akira Kaneko and 1 more

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Malaria journal, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.2field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Genetic variation of theFrontiers in parasitology · 2024
    Article
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 4 countries.

Jesse N GitakaGraduate School of Biomedical Sciences, Nagasaki University, 1-12-4 Sakamoto, Nagasaki, 852-8523, Japan.
Mika TakedaDepartment of Protozoology, Institute of Tropical Medicine (NEKKEN), Nagasaki University, 1-12-4 Sakamoto, Nagasaki, 852-8523, Japan.
Masatsugu KimuraRadioisotope Centre, Graduate School of Medicine, Osaka City University, 1-4-3 Asahimachi, Abeno-ku, Osaka, 545-8585, Japan.
Zulkarnain Md IdrisIsland Malaria Group, Department of Microbiology, Tumor and Cell Biology (MTC), Karolinska Institutet, Nobels väg 16, SE 171 77, Stockholm, Sweden.
Chim W ChanIsland Malaria Group, Department of Microbiology, Tumor and Cell Biology (MTC), Karolinska Institutet, Nobels väg 16, SE 171 77, Stockholm, Sweden.
James KongereNairobi Research Station, Nagasaki University Institute of Tropical Medicine-Kenya Medical Research Institute (NUITM-KEMRI) Project, Institute of Tropical Medicine (NEKKEN), Nagasaki University, P. O. Box 19993-00202, Nairobi, Kenya.
Kazuhide YahataGraduate School of Biomedical Sciences, Nagasaki University, 1-12-4 Sakamoto, Nagasaki, 852-8523, Japan.
Francis W MuregiDepartment of Clinical Medicine, Mount Kenya University, PO Box 342-01000, Thika, Kenya.
Yoshio IchinoseGraduate School of Biomedical Sciences, Nagasaki University, 1-12-4 Sakamoto, Nagasaki, 852-8523, Japan.
Akira KanekoIsland Malaria Group, Department of Microbiology, Tumor and Cell Biology (MTC), Karolinska Institutet, Nobels väg 16, SE 171 77, Stockholm, Sweden.
Osamu KanekoGraduate School of Biomedical Sciences, Nagasaki University, 1-12-4 Sakamoto, Nagasaki, 852-8523, Japan. okaneko@nagasaki-u.ac.jp.ORCID 0000-0003-0675-8296
Nagasaki University · JPKarolinska Institutet · SEKenya Medical Research Institute · KEMount Kenya University · KEOsaka City University · JPUniversity Kebangsaan Malaysia Medical Centre · MY

Funding

Wellcome Trust
6 · The paper itself

Abstract

backgroundPlasmodium falciparum SURFIN

resultsPositively significant departures from neutral expectations were detected on the surf

conclusionsThe authors infer that the high polymorphism of SURFIN

Indexed as

Frameshift MutationGene DosagePolymorphism, GeneticSelection, GeneticKenyaMembrane ProteinsPlasmodium falciparumProtozoan ProteinsSequence Analysis, DNAThailandMembrane ProteinsProtozoan ProteinsSURFIN4.1 protein, Plasmodium falciparumCopy number variationFrameshiftMalariaPlasmodium falciparumSelectionSURFIN4.1

Identifiers

PMID28253868
PMCPMC5335827
OpenAlexW2594181212

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.