Evidence map›Paper›PMID 28253354›Full record

ArticlePloS one2017

Phycobilisome truncation causes widespread proteome changes in Synechocystis sp. PCC 6803.

Michelle Liberton, William B Chrisler, Carrie D Nicora, Ronald J Moore, Richard D Smith, David W Koppenaal, Himadri B Pakrasi, Jon M Jacobs

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 28 citations in OpenAlex.

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  10. Probing the electric field across thylakoid membranes in cyanobacteria.Proceedings of the National Academy of Sciences of the United States of America · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Michelle LibertonDepartment of Biology, Washington University, St. Louis, Missouri, United States of America.
William B ChrislerEnvironmental Molecular Sciences Laboratory, Pacific Northwest National Laboratory, Richland, Washington, United States of America.
Carrie D NicoraBiological Sciences Division, Pacific Northwest National Laboratory, Richland, Washington, United States of America.
Ronald J MooreBiological Sciences Division, Pacific Northwest National Laboratory, Richland, Washington, United States of America.
Richard D SmithBiological Sciences Division, Pacific Northwest National Laboratory, Richland, Washington, United States of America.
David W KoppenaalEnvironmental Molecular Sciences Laboratory, Pacific Northwest National Laboratory, Richland, Washington, United States of America.
Himadri B PakrasiDepartment of Biology, Washington University, St. Louis, Missouri, United States of America.
Jon M JacobsBiological Sciences Division, Pacific Northwest National Laboratory, Richland, Washington, United States of America.
Pacific Northwest National Laboratory · USWashington University in St. Louis · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In cyanobacteria such as Synechocystis sp. PCC 6803, large antenna complexes called phycobilisomes (PBS) harvest light and transfer the energy to the photosynthetic reaction centers. Modification of the light harvesting machinery in cyanobacteria has widespread consequences, causing changes in cell morphology and physiology. In the current study, we investigated the effects of PBS truncation on the proteomes of three Synechocystis 6803 PBS antenna mutants. These range from the progressive truncation of phycocyanin rods in the CB and CK strains, to full removal of PBS in the PAL mutant. Comparative quantitative protein results revealed surprising changes in protein abundances in the mutant strains. Our results showed that PBS truncation in Synechocystis 6803 broadly impacted core cellular mechanisms beyond light harvesting and photosynthesis. Specifically, we observed dramatic alterations in membrane transport mechanisms, where the most severe PBS truncation in the PAL strain appeared to suppress the cellular utilization and regulation of bicarbonate and iron. These changes point to the role of PBS as a component critical to cell function, and demonstrate the continuing need to assess systems-wide protein based abundances to understand potential indirect phenotypic effects.

Indexed as

ProteomeBacterial ProteinsBiological TransportChromatography, High Pressure LiquidHydrogen-Ion ConcentrationIronMutationNitrogenPhycobilisomesSynechocystisTandem Mass SpectrometryBacterial ProteinsIronNitrogenPhycobilisomesProteome

Identifiers

PMID28253354
PMCPMC5333879
OpenAlexW2591607799

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.