Evidence map›Paper›PMID 28253351›Full record

ArticlePloS one2017

DNA repair and replication links to pluripotency and differentiation capacity of pig iPS cells.

Kai Liu, Jian Mao, Lipu Song, Anran Fan, Sheng Zhang, Jianyu Wang, Nana Fan, Na Liu, Xiaoying Ye, Haifeng Fu and 8 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 7 institutions in 1 country.

Kai LiuExperimental and Translational Research Center, Beijing Friendship Hospital, Capital Medical University, Beijing, China.
Jian MaoState Key Laboratory of Medicinal Chemical Biology, 2011 Collaborative Innovation Center for Biotherapy, College of Life Sciences, Nankai University, Tianjin, China.
Lipu SongBeijing Institute of Genomics, Chinese academy of Sciences, Beijing, China.
Anran FanFirst Hospital, Jilin University, Changchun, China.
Sheng ZhangFirst Hospital, Jilin University, Changchun, China.
Jianyu WangCollege of Life Science, Northeast Agricultural University, Harbin, China.
Nana FanGuangzhou Institutes of Biomedicine and Health, Chinese Academy of Sciences, Guangzhou, China.
Na LiuState Key Laboratory of Medicinal Chemical Biology, 2011 Collaborative Innovation Center for Biotherapy, College of Life Sciences, Nankai University, Tianjin, China.
Xiaoying YeState Key Laboratory of Medicinal Chemical Biology, 2011 Collaborative Innovation Center for Biotherapy, College of Life Sciences, Nankai University, Tianjin, China.
Haifeng FuState Key Laboratory of Medicinal Chemical Biology, 2011 Collaborative Innovation Center for Biotherapy, College of Life Sciences, Nankai University, Tianjin, China.
Zhongcheng ZhouState Key Laboratory of Medicinal Chemical Biology, 2011 Collaborative Innovation Center for Biotherapy, College of Life Sciences, Nankai University, Tianjin, China.
Yong WangCollege of Basic Medical Sciences, Third Military Medical University, Chongqing, China.
Hong WeiCollege of Basic Medical Sciences, Third Military Medical University, Chongqing, China.
Zhonghua LiuCollege of Life Science, Northeast Agricultural University, Harbin, China.
Ziyi LiFirst Hospital, Jilin University, Changchun, China.
Liangxue LaiGuangzhou Institutes of Biomedicine and Health, Chinese Academy of Sciences, Guangzhou, China.
Xumin WangBeijing Institute of Genomics, Chinese academy of Sciences, Beijing, China.
Lin LiuState Key Laboratory of Medicinal Chemical Biology, 2011 Collaborative Innovation Center for Biotherapy, College of Life Sciences, Nankai University, Tianjin, China.
Nankai University · CNArmy Medical University · CNBeijing Institute of Genomics · CNChinese Academy of Sciences · CNJilin University · CNNortheast Agricultural University · CNFirst Hospital of Jilin University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Pigs are proposed to be suitable large animal models for test of the efficacy and safety of induced pluripotent stem cells (iPSCs) for stem cell therapy, but authentic pig ES/iPS cell lines with germline competence are rarely produced. The pathways or signaling underlying the defective competent pig iPSCs remain poorly understood. By improving induction conditions using various small chemicals, we generated pig iPSCs that exhibited high pluripotency and differentiation capacity that can contribute to chimeras. However, their potency was reduced with increasing passages by teratoma formation test, and correlated with declined expression levels of Rex1, an important marker for naïve state. By RNA-sequencing analysis, genes related to WNT signaling were upregulated and MAPK signaling and TGFβ pathways downregulated in pig iPSCs compared to fibroblasts, but they were abnormally expressed during passages. Notably, pathways involving in DNA repair and replication were upregulated at early passage, but downregulated in iPSCs during prolonged passage in cluster with fibroblasts. Our data suggests that reduced DNA repair and replication capacity links to the instability of pig iPSCs. Targeting these pathways may facilitate generation of truly pluripotent pig iPSCs, with implication in translational studies.

Indexed as

Cell DifferentiationDNA RepairDNA ReplicationAnimalsInduced Pluripotent Stem CellsMAP Kinase Signaling SystemMiceSwine

Identifiers

PMID28253351
PMCPMC5333863
OpenAlexW2593892526

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.