Evidence map›Paper›PMID 28251343›Full record

ArticleEuropean journal of nutrition2018

Methyl-donor depletion of head and neck cancer cells in vitro establishes a less aggressive tumour cell phenotype.

Vanessa Hearnden, Hilary J Powers, Abeir Elmogassabi, Rosanna Lowe, Craig Murdoch

Open access · hybridAbstract read
In one paragraph

Article in European journal of nutrition, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.4field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 9 citations in OpenAlex.

  1. Review
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  7. Epigenetic silencing ofClinical epigenetics · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Vanessa HearndenHuman Nutrition Unit, Department of Oncology, University of Sheffield, Sheffield, S10 2RX, UK.
Hilary J PowersHuman Nutrition Unit, Department of Oncology, University of Sheffield, Sheffield, S10 2RX, UK.
Abeir ElmogassabiHuman Nutrition Unit, Department of Oncology, University of Sheffield, Sheffield, S10 2RX, UK.
Rosanna LoweHuman Nutrition Unit, Department of Oncology, University of Sheffield, Sheffield, S10 2RX, UK.
Craig MurdochSchool of Clinical Dentistry, University of Sheffield, Sheffield, S10 2TA, UK. c.murdoch@sheffield.ac.uk.ORCID http://orcid.org/0000-0001-9724-122X
University of Sheffield · GB

Funding

World Cancer Research Fund International 2012/587
6 · The paper itself

Abstract

purposeDNA methylation plays a fundamental role in the epigenetic control of carcinogenesis and is, in part, influenced by the availability of methyl donors obtained from the diet. In this study, we developed an in-vitro model to investigate whether methyl donor depletion affects the phenotype and gene expression in head and neck squamous cell carcinoma (HNSCC) cells.

methodsHNSCC cell lines (UD-SCC2 and UPCI-SCC72) were cultured in medium deficient in methionine, folate, and choline or methyl donor complete medium. Cell doubling-time, proliferation, migration, and apoptosis were analysed. The effects of methyl donor depletion on enzymes controlling DNA methylation and the pro-apoptotic factors death-associated protein kinase-1 (DAPK1) and p53 upregulated modulator of apoptosis (PUMA) were examined by quantitative-PCR or immunoblotting.

resultsHNSCC cells cultured in methyl donor deplete conditions showed significantly increased cell doubling times, reduced cell proliferation, impaired cell migration, and a dose-dependent increase in apoptosis when compared to cells cultured in complete medium. Methyl donor depletion significantly increased the gene expression of DNMT3a and TET-1, an effect that was reversed upon methyl donor repletion in UD-SCC2 cells. In addition, expression of DAPK1 and PUMA was increased in UD-SCC2 cells cultured in methyl donor deplete compared to complete medium, possibly explaining the observed increase in apoptosis in these cells.

conclusionTaken together, these data show that depleting HNSCC cells of methyl donors reduces the growth and mobility of HNSCC cells, while increasing rates of apoptosis, suggesting that a methyl donor depleted diet may significantly affect the growth of established HNSCC.

Indexed as

DNA MethylationApoptosisCarcinoma, Squamous CellCell Line, TumorCell ProliferationHead and Neck NeoplasmsHumansPhenotypeApoptosisDAPKDNA methylationHead and neck cancerMethyl donor

Identifiers

PMID28251343
PMCPMC5959985
OpenAlexW2592711565

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.