ArticleHereditas2017
Genome-wide association study of rust traits in orchardgrass using SLAF-seq technology.
Article in Hereditas, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
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Who cites it
9 citing papers in PubMed, 17 citations in OpenAlex.
- Population structure and genetic diversity of mango (Frontiers in plant science · 2024Article
- Identification of QTLs for Grain Protein Content in Russian Spring Wheat Varieties.Plants (Basel, Switzerland) · 2022Article
- Investigation of genetic relationships within three Miscanthus species using SNP markers identified with SLAF-seq.BMC genomics · 2022Article
- Phylogeographical Pattern and Population Evolution History of IndigenousFrontiers in plant science · 2022Article
- Genetic Divergence and Population Structure in Weedy and Cultivated Broomcorn Millets (Frontiers in plant science · 2021Article
- Dissection of novel candidate genes for grain texture in Russian wheat varieties.Plant molecular biology · 2020Article
- Characterization of molecular diversity and genome-wide association study of stripe rust resistance at the adult plant stage in Northern Chinese wheat landraces.BMC genetics · 2019Article
- Development of High-Density SNP Markers and Their Application in Evaluating Genetic Diversity and Population Structure inFrontiers in plant science · 2019Article
- Toward Genomics-Based Breeding in C3 Cool-Season Perennial Grasses.Frontiers in plant science · 2017Review
Corrections and comments
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Authors and funding
8 authors at 3 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundWhile orchardgrass (
resultsIn this study, a genome-wide association study (GWAS) was performed using specific-locus amplified fragment sequencing (SLAF-seq) technology in orchardgrass. A total of 2,334,889 SLAF tags were generated to produce 2,309,777 SNPs. ADMIXTURE analysis revealed unstructured subpopulations for 33 accessions, indicating that this orchardgrass population could be used for association analysis. Linkage disequilibrium (LD) analysis revealed an average r
conclusionsThe large number of SNPs associated with rust traits and these two candidate genes may provide the basis for further research on rust resistance mechanisms and marker-assisted selection (MAS) for rust-resistant lineages.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.