Evidence map›Paper›PMID 28250572›Full record

ArticleProceedings of SPIE--the International Society for Optical Engineering2016

A semi-automatic framework of measuring pulmonary arterial metrics at anatomic airway locations using CT imaging.

Dakai Jin, Junfeng Guo, Timothy M Dougherty, Krishna S Iyer, Eric A Hoffman, Punam K Saha

Open access · greenAbstract read
In one paragraph

Article in Proceedings of SPIE--the International Society for Optical Engineering, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.0field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Dakai JinDept. of Electrical and Computer Engineering, University of Iowa, Iowa City, IA, USA.
Junfeng GuoDept. of Biomedical Engineering, University of Iowa, Iowa City, IA, USA; Dept. of Radiology, University of Iowa, Iowa City, IA, USA.
Timothy M DoughertyDept. of Biomedical Engineering, University of Iowa, Iowa City, IA, USA; Dept. of Radiology, University of Iowa, Iowa City, IA, USA.
Krishna S IyerDept. of Biomedical Engineering, University of Iowa, Iowa City, IA, USA; Dept. of Radiology, University of Iowa, Iowa City, IA, USA.
Eric A HoffmanDept. of Biomedical Engineering, University of Iowa, Iowa City, IA, USA; Dept. of Radiology, University of Iowa, Iowa City, IA, USA.
Punam K SahaDept. of Electrical and Computer Engineering, University of Iowa, Iowa City, IA, USA; Dept. of Radiology, University of Iowa, Iowa City, IA, USA.
University of Iowa · US

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM007337 · NIGMS · UNIVERSITY OF IOWA · PI GEYER, PAMELA K., LENTZ, STEVEN R · 1985 to 2020
$15.9M
Multi-center Structural & Functional Quantitative CT Pulmonary PhenotypingR01HL112986 · NHLBI · UNIVERSITY OF IOWA · PI HOFFMAN, ERIC ALFRED · 2012 to 2016
$4.6M
Functional CT Assessment of Pulmonary Arterial Dysfunction in Smoking Associated EmphysemaR01HL130883 · NHLBI · UNIVERSITY OF IOWA · PI HOFFMAN, ERIC ALFRED · 2016 to 2020
$3.6M
Defining the role of early pulmonary vascular disease in COPDR01HL126838 · NHLBI · UNIVERSITY OF IOWA · PI HAN, MEILAN K, HOFFMAN, ERIC ALFRED · 2015 to 2018
$3.1M
Ultra-low Dose, High Speed, High Resolution, Multispectral, Multi-Source MDCT ScaS10OD018526 · OD · UNIVERSITY OF IOWA · PI HOFFMAN, ERIC ALFRED · 2015 to 2015
$2.0M
NHLBI NIH HHS R01 HL112986NHLBI NIH HHS R01 HL126838NHLBI NIH HHS R01 HL130883NIGMS NIH HHS T32 GM007337NIH HHS S10 OD018526
6 · The paper itself

Abstract

Pulmonary vascular dysfunction has been implicated in smoking-related susceptibility to emphysema. With the growing interest in characterizing arterial morphology for early evaluation of the vascular role in pulmonary diseases, there is an increasing need for the standardization of a framework for arterial morphological assessment at airway segmental levels. In this paper, we present an effective and robust semi-automatic framework to segment pulmonary arteries at different anatomic airway branches and measure their cross-sectional area (CSA). The method starts with user-specified endpoints of a target arterial segment through a custom-built graphical user interface. It then automatically detect the centerline joining the endpoints, determines the local structure orientation and computes the CSA along the centerline after filtering out the adjacent pulmonary structures, such as veins or airway walls. Several new techniques are presented, including collision-impact based cost function for centerline detection, radial sample-line based CSA computation, and outlier analysis of radial distance to subtract adjacent neighboring structures in the CSA measurement. The method was applied to repeat-scan pulmonary multirow detector CT (MDCT) images from ten healthy subjects (age: 21-48 Yrs, mean: 28.5 Yrs; 7 female) at functional residual capacity (FRC). The reproducibility of computed arterial CSA from four airway segmental regions in middle and lower lobes was analyzed. The overall repeat-scan intra-class correlation (ICC) of the computed CSA from all four airway regions in ten subjects was 96% with maximum ICC found at LB10 and RB4 regions.

Indexed as

airway treecomputed tomographycross sectional areaminimum cost pathPulmonary arteryradial sample line

Identifiers

PMID28250572
PMCPMC5327735
OpenAlexW2331859024

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.