Evidence map›Paper›PMID 28249600›Full record

ArticleBMC medical genetics2017

Identification of somatic mutations using whole-exome sequencing in Korean patients with acute myeloid leukemia.

Seong Gu Heo, Youngil Koh, Jong Kwang Kim, Jongsun Jung, Hyung-Lae Kim, Sung-Soo Yoon, Ji Wan Park

Open access · goldAbstract read
In one paragraph

Article in BMC medical genetics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.5field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 6 institutions in 1 country.

Seong Gu HeoDepartment of Medical Genetics, College of Medicine, Hallym University, 1 Hallymdaehak-gil, Chuncheon, Gangwon-do, 24252, Republic of Korea.
Youngil KohDepartment of Internal Medicine, Seoul National University Hospital, Seoul, Republic of Korea.
Jong Kwang KimOmics Core Lab., National Cancer Center, Goyang, Republic of Korea.
Jongsun JungSyntekabio Inc., Seoul, Republic of Korea.
Hyung-Lae KimDepartment of Biochemistry, School of Medicine, Ewha Womans University, Seoul, Republic of Korea.
Sung-Soo YoonDepartment of Internal Medicine, Seoul National University Hospital, Seoul, Republic of Korea.
Ji Wan ParkDepartment of Medical Genetics, College of Medicine, Hallym University, 1 Hallymdaehak-gil, Chuncheon, Gangwon-do, 24252, Republic of Korea. jwpark@hallym.ac.kr.ORCID 0000-0003-0840-1696
Seoul National University Hospital · KREwha Womans University · KRHallym University · KRNational Cancer Center · KRSeoul National University · KRSyneos Health (South Korea) · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundAcute myeloid leukemia (AML) is a biologically and clinically heterogeneous cancer of the bone marrow that is characterized by the rapid growth of abnormal myeloid cells.

methodsWe performed a mutational analysis to identify AML somatic mutations using the whole-exome sequencing data of 36 tumor-normal sample pairs from Korean patients with de novo AML. We explored the functional impact of the genes identified in the mutational analyses through an integrated Gene Ontology (GO) and pathway analysis.

resultsA total of 11 genes, including NEFH (p = 6.27 × 10

conclusionsMorphological AML subtypes may in part reflect subtype specific patterns of genomic alterations. Following validation, future studies to evaluate the usefulness of these genes in genetic testing for the early diagnosis and prognostic prediction of AML patients would be worthwhile.

Indexed as

AdultAsian PeopleCodon, NonsenseDNA Mutational AnalysisExomeFemaleFrameshift MutationGenetic Predisposition to DiseaseHumansINDEL MutationLeukemia, Myeloid, AcuteMaleMiddle AgedMutation, MissenseNeoplasm ProteinsRepublic of KoreaCodon, NonsenseNeoplasm ProteinsAcute myeloid leukemiaGene ontologyPathway analysisSomatic mutationSubtype-specific mutationWhole-exome sequencing

Identifiers

PMID28249600
PMCPMC5333433
OpenAlexW2592248045

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.