Evidence map›Paper›PMID 28245828›Full record

ArticleMicrobial cell factories2017

Transcriptional activator Cat8 is involved in regulation of xylose alcoholic fermentation in the thermotolerant yeast Ogataea (Hansenula) polymorpha.

Justyna Ruchala, Olena O Kurylenko, Nitnipa Soontorngun, Kostyantyn V Dmytruk, Andriy A Sibirny

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Article in Microbial cell factories, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 38 citations in OpenAlex.

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  18. Advances in UsingFrontiers in bioengineering and biotechnology · 2019
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4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

5 authors at 3 institutions in 3 countries.

Justyna RuchalaDepartment of Biotechnology and Microbiology, University of Rzeszow, Zelwerowicza 4, 35-601, Rzeszow, Poland.
Olena O KurylenkoDepartment of Molecular Genetics and Biotechnology, Institute of Cell Biology, Drahomanov Str., 14/16, Lviv, 79005, Ukraine.
Nitnipa SoontorngunKing Mongkut Technical University, Thonbury, Thailand.
Kostyantyn V DmytrukDepartment of Molecular Genetics and Biotechnology, Institute of Cell Biology, Drahomanov Str., 14/16, Lviv, 79005, Ukraine.
Andriy A SibirnyDepartment of Biotechnology and Microbiology, University of Rzeszow, Zelwerowicza 4, 35-601, Rzeszow, Poland. sibirny@cellbiol.lviv.ua.
Institute of Cell Biology · UAKing Mongkut's University of Technology Thonburi · THRzeszów University · PL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundEfficient xylose alcoholic fermentation is one of the key to a successful lignocellulosic ethanol production. However, regulation of this process in the native xylose-fermenting yeasts is poorly understood. In this work, we paid attention to the transcriptional factor Cat8 and its possible role in xylose alcoholic fermentation in Ogataea (Hansenula) polymorpha. In Saccharomyces cerevisiae, organism, which does not metabolize xylose, gene CAT8 encodes a Zn-cluster transcriptional activator necessary for expression of genes involved in gluconeogenesis, respiration, glyoxylic cycle and ethanol utilization. Xylose is a carbon source that could be fermented to ethanol and simultaneously could be used in gluconeogenesis for hexose synthesis. This potentially suggests involvement of CAT8 in xylose metabolism.

resultsHere, the role of CAT8 homolog in the natural xylose-fermenting thermotolerant yeast O. polymorpha was characterized. The CAT8 ortholog was identified in O. polymorpha genome and deleted both in the wild-type strain and in advanced ethanol producer from xylose. Constructed cat8Δ strain isolated from wild strain showed diminished growth on glycerol, ethanol and xylose as well as diminished respiration on the last substrate. At the same time, cat8Δ mutant isolated from the best available O. polymorpha ethanol producer showed only visible defect in growth on ethanol. CAT8 deletant was characterized by activated transcription of genes XYL3, DAS1 and RPE1 and slight increase in the activity of several enzymes involved in xylose metabolism and alcoholic fermentation. Ethanol production from xylose in cat8Δ mutants in the background of wild-type strain and the best available ethanol producer from xylose increased for 50 and 30%, respectively. The maximal titer of ethanol during xylose fermentation was 12.5 g ethanol/L at 45 °C. Deletion of CAT8 did not change ethanol production from glucose. Gene CAT8 was also overexpressed under control of the strong constitutive promoter GAP of glyceraldehyde-3-phosphate dehydrogenase. Corresponding strains showed drop in ethanol production in xylose medium whereas glucose alcoholic fermentation remained unchanged. Available data suggest on specific role of Cat8 in xylose alcoholic fermentation.

conclusionsThe CAT8 gene is one of the first identified genes specifically involved in regulation of xylose alcoholic fermentation in the natural xylose-fermenting yeast O. polymorpha.

Indexed as

FermentationGene Expression Regulation, FungalEthanolFungal ProteinsGenetic EngineeringGlyceraldehyde-3-Phosphate DehydrogenasesGlycerolHot TemperatureMutationPichiaTranscription FactorsXyloseEthanolFungal ProteinsGlyceraldehyde-3-Phosphate DehydrogenasesGlycerolTranscription FactorsXyloseHigh-temperature alcoholic fermentationOgataea (Hansenula) polymorphaTranscriptional activatorXyloseYeast

Identifiers

PMID28245828
PMCPMC5331723
OpenAlexW2593473774

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.