Evidence map›Paper›PMID 28245235›Full record

ArticlePLoS computational biology2017

The role of the Hes1 crosstalk hub in Notch-Wnt interactions of the intestinal crypt.

Sophie K Kay, Heather A Harrington, Sarah Shepherd, Keith Brennan, Trevor Dale, James M Osborne, David J Gavaghan, Helen M Byrne

Open access · goldAbstract read
In one paragraph

Article in PLoS computational biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
6.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 121 citations in OpenAlex.

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  17. Regulation of Limbal Epithelial Stem Cells: Importance of the Niche.International journal of molecular sciences · 2021
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  20. Collagen IV differentially regulates planarian stem cell potency and lineage progression.Proceedings of the National Academy of Sciences of the United States of America · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 2 countries.

Sophie K KayDepartment of Computer Science, University of Oxford, Oxford, U.K.ORCID 0000-0002-1623-9265
Heather A HarringtonMathematical Institute, University of Oxford, Oxford, U.K.
Sarah ShepherdSchool of Mathematical Sciences, University of Nottingham, Nottingham, U.K.
Keith BrennanWellcome Trust Centre for Cell Matrix Research, University of Manchester, Manchester, U.K.ORCID 0000-0002-9384-125X
Trevor DaleSchool of Biosciences, Cardiff University, Cardiff, U.K.
James M OsborneSchool of Mathematics and Statistics, University of Melbourne, Melbourne, Australia.ORCID 0000-0002-5622-0104
David J GavaghanDepartment of Computer Science, University of Oxford, Oxford, U.K.
Helen M ByrneDepartment of Computer Science, University of Oxford, Oxford, U.K.ORCID 0000-0003-1771-5910
University of Oxford · GBCardiff University · GBThe University of Melbourne · AUUniversity of Nottingham · GBWellcome Centre for Cell-Matrix Research · GB

Funding

Cancer Research UK 15937
6 · The paper itself

Abstract

The Notch pathway plays a vital role in determining whether cells in the intestinal epithelium adopt a secretory or an absorptive phenotype. Cell fate specification is coordinated via Notch's interaction with the canonical Wnt pathway. Here, we propose a new mathematical model of the Notch and Wnt pathways, in which the Hes1 promoter acts as a hub for pathway crosstalk. Computational simulations of the model can assist in understanding how healthy intestinal tissue is maintained, and predict the likely consequences of biochemical knockouts upon cell fate selection processes. Chemical reaction network theory (CRNT) is a powerful, generalised framework which assesses the capacity of our model for monostability or multistability, by analysing properties of the underlying network structure without recourse to specific parameter values or functional forms for reaction rates. CRNT highlights the role of β-catenin in stabilising the Notch pathway and damping oscillations, demonstrating that Wnt-mediated actions on the Hes1 promoter can induce dynamic transitions in the Notch system, from multistability to monostability. Time-dependent model simulations of cell pairs reveal the stabilising influence of Wnt upon the Notch pathway, in which β-catenin- and Dsh-mediated action on the Hes1 promoter are key in shaping the subcellular dynamics. Where Notch-mediated transcription of Hes1 dominates, there is Notch oscillation and maintenance of fate flexibility; Wnt-mediated transcription of Hes1 favours bistability akin to cell fate selection. Cells could therefore regulate the proportion of Wnt- and Notch-mediated control of the Hes1 promoter to coordinate the timing of cell fate selection as they migrate through the intestinal epithelium and are subject to reduced Wnt stimuli. Furthermore, mutant cells characterised by hyperstimulation of the Wnt pathway may, through coupling with Notch, invert cell fate in neighbouring healthy cells, enabling an aberrant cell to maintain its neighbours in mitotically active states.

Indexed as

Models, BiologicalBiological ClocksCells, CulturedComputer SimulationHumansIntestinal MucosaReceptor Cross-TalkReceptors, NotchSignal TransductionTranscription Factor HES-1Wnt Signaling PathwayHES1 protein, humanReceptors, NotchTranscription Factor HES-1

Identifiers

PMID28245235
PMCPMC5363986
OpenAlexW2512618608

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.