Evidence map›Paper›PMID 28244520›Full record

ArticleOrganic & biomolecular chemistry2017

Structure-activity relationships of the ATP cofactor in ligase-catalysed oligonucleotide polymerisations.

Yi Lei, Ryan Hili

Abstract read
In one paragraph

Article in Organic & biomolecular chemistry, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.6field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Yi LeiDepartment of Chemistry, University of Georgia, Athens, GA 30602, USA. rhili@uga.edu.
Ryan Hili
University of Georgia · US

Funding

Functionalized DNA as glycan recognition moleculesR21CA207711 · NCI · UNIVERSITY OF GEORGIA · PI HILI, RYAN · 2016 to 2016
$255k
NCI NIH HHS R21 CA207711
6 · The paper itself

Abstract

A T4 DNA ligase-catalysed oligonucleotide polymerisation process has been recently developed to enable the incorporation of multiple functional groups throughout a nucleic acid polymer. T4 DNA ligase requires ATP as a cofactor to catalyse phosphodiester bond formation during the polymerisation process. Herein, we describe the structure-activity relationship of ATP within the context of T4 DNA ligase-catalyzed oligonucleotide polymerisation. Using high-throughput sequencing, we study not only the influence of ATP modification on polymerisation efficiency, but also on the fidelity and sequence bias of the polymerisation process.

Indexed as

Adenosine TriphosphateBiocatalysisDNA LigasesMolecular StructureOligonucleotidesPolymerizationStructure-Activity RelationshipAdenosine TriphosphateDNA LigasesOligonucleotides

Identifiers

PMID28244520
PMCPMC5419680
OpenAlexW2588542744

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.