Evidence map›Paper›PMID 28243982›Full record

ArticleWorld journal of microbiology & biotechnology2017

Construction of pyruvate producing strain with intact pyruvate dehydrogenase and genome-wide transcription analysis.

Maohua Yang, Xiang Zhang

Open access · greenAbstract read
PubMed Publisher
In one paragraph

Article in World journal of microbiology & biotechnology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 27 citations in OpenAlex.

  1. EfficientSynthetic and systems biotechnology · 2026
    Article
  2. Article
  3. An Analysis of the Mechanism About COInternational journal of molecular sciences · 2024
    Article
  4. Article
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  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 1 country.

Maohua YangInstitute of Process Engineering, Chinese Academy of Sciences, Beijing, 100190, People's Republic of China. mhyang@ipe.ac.cn.
Xiang ZhangInstitute of Agro-food Science and Technology, Shandong Academy of Agricultural Sciences, No. 202 North Industrial Road, Ji'nan, 250100, People's Republic of China.
Institute of Process Engineering · CNShandong Academy of Agricultural Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To obtain strain YP211 with a high tendency for accumulating pyruvate, central metabolic pathways were modified in Escherichia coli MG1655. Specifically, seven genes (ldhA, pflB, pta-ackA, poxB, ppc, frdBC) were knocked out sequentially and full pyruvate dehydrogenase was retained. In batch fermentation with M9 medium, pyruvate yield and production rate reached 0.63 g/g glucose and 1.89 g/(1 h), respectively. Meanwhile, the production of acetate, succinate, and other carboxylates was effectively controlled. To understand the physiological observations, we further completed genome-wide transcription analysis of wild-type and YP211. As the acetic acid pathways were blocked, the pathways of convertion of pyruvate to phosphoenol pyruvate and acetyl CoA were enhanced. The transcription of pck, as an alternative gene for ppc, was increased by 2.6 times. So even if gene ppc was inactivated, the tricarboxylic acid pathway was still enhanced in YP211. In order to balance intracellular NADH/NAD

Indexed as

Gene Knockout TechniquesBatch Cell Culture TechniquesEscherichia coliEscherichia coli ProteinsFermentationGene Expression ProfilingGene Expression Regulation, BacterialGenome, BacterialMetabolic EngineeringMetabolic Networks and PathwaysOxidoreductasesPhosphoenolpyruvatePyruvic AcidEscherichia coli ProteinsOxidoreductasesPhosphoenolpyruvatePyruvic AcidEscherichia coliFlagellar assemblyOxidation–ReductionPyruvateTranscription analysis

Identifiers

PMID28243982
OpenAlexW2594174543

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.