Evidence map›Paper›PMID 28241747›Full record

ArticleBMC infectious diseases2017

Screening of TNFα, IL-10 and TLR4 single nucleotide polymorphisms in individuals with asymptomatic and chronic cutaneous leishmaniasis in Colombia: a pilot study.

Angélica Mera-Ramírez, Andrés Castillo, Yenifer Orobio, María Adelaida Gómez, Carolina Gallego-Marin

Open access · goldAbstract read
In one paragraph

Article in BMC infectious diseases, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed, 1 pooled it
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 1 synthesis or guideline pooled it, 22 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Human visceral leishmaniasis and polymorphisms in interleukin-coding genes: a systematic review.The journal of venomous animals and toxins including tropical diseases · 2024
    Review
  4. Article
  5. Article
  6. Role of interleukin-10 polymorphisms and haplotypes in polycystic ovary syndrome risk.International journal of clinical and experimental pathology · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Angélica Mera-RamírezCentro Internacional de Entrenamiento e Investigaciones Médicas-CIDEIM, Carrera 125 #, 19-225, Cali, Colombia.
Andrés CastilloDepartamento de Biología. Facultad de Ciencias Naturales y Exactas, Universidad del Valle, Calle 13 No, 100-00, Cali, Colombia.
Yenifer OrobioCentro Internacional de Entrenamiento e Investigaciones Médicas-CIDEIM, Carrera 125 #, 19-225, Cali, Colombia.
María Adelaida GómezCentro Internacional de Entrenamiento e Investigaciones Médicas-CIDEIM, Carrera 125 #, 19-225, Cali, Colombia.
Carolina Gallego-MarinCentro Internacional de Entrenamiento e Investigaciones Médicas-CIDEIM, Carrera 125 #, 19-225, Cali, Colombia. cgallego@cideim.org.co.
Centro Internacional de Entrenamiento e Investigaciones Medicas · COUniversidad del Valle · CO

Funding

Vector/Host-Parasite Interface of Leishmaniasis in ColombiaD43TW006589 · FIC · YALE UNIVERSITY · PI GORE SARAVIA, NANCY, TSCHUDI, CHRISTIAN · 2003 to 2024
$4.3M
Role of the cytosolic DNA sensor cGAS in malariaR21AI124171 · NIAID · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI GOLENBOCK, DOUGLAS T · 2016 to 2017
$437k
FIC NIH HHS D43 TW006589NIAID NIH HHS R21 AI124171
6 · The paper itself

Abstract

backgroundClinical manifestations of cutaneous leishmaniasis (CL) caused by Leishmania (Viannia) range from asymptomatic infection to self-limited, or chronic (non-healing) cutaneous lesions. Given the critical role of the immune response in the clinical outcome of CL, it is plausible that functional polymorphisms in immune-related genes contribute to define the clinical manifestations of human infection.

methodsDNA samples from a retrospective cohort of individuals from an endemic area of L. V. panamensis transmission in Colombia were used to determine the frequency of SNPs in TNFα, IL-10 and TLR4 genes. DNA samples were obtained from 74 adult participants: 38 patients presenting chronic cutaneous leishmaniasis (CCL) and 36 individuals with asymptomatic infection. Genotyping of TNFα-308G/A, IL-10-819C/T, and TLR4 Asp299Gly and Thr399Ile SNPs, was conducted by PCR-restriction fragment length polymorphisms. Allele, genotype frequencies and associations between SNPs and clinical groups were evaluated.

resultsThe A allele in TNFα-308G/A SNP was found more frequently in individuals with asymptomatic infection (16% vs 7%), whereas the CC genotype in IL-10-819 C/T SNP was more frequent in patients with CCL (34% vs. 27% in asymptomatic individuals). No differences in allele frequencies for TLR4 SNPs were found among groups.

conclusionThis study provides a reference base for statistical power calculation and design of association studies of genetic polymorphisms in immune response related-genes and the pathogenesis of infections caused by L. V. panamensis.

Indexed as

Leishmania braziliensisPolymorphism, Single NucleotideAdolescentAdultAgedAmplified Fragment Length Polymorphism AnalysisAsymptomatic DiseasesCase-Control StudiesChildChronic DiseaseColombiaFemaleGene FrequencyGenetic MarkersGenotypeGenotyping TechniquesGenetic MarkersIL10 protein, humanInterleukin-10TLR4 protein, humanToll-Like Receptor 4Tumor Necrosis Factor-alphaAsymptomatic infectionChronicityCutaneous leishmaniasisSingle nucleotide polymorphism

Identifiers

PMID28241747
PMCPMC5330139
OpenAlexW2593776793

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.