Evidence map›Paper›PMID 28241136›Full record

ArticleNature2017

TIRR regulates 53BP1 by masking its histone methyl-lysine binding function.

Pascal Drané, Marie-Eve Brault, Gaofeng Cui, Khyati Meghani, Shweta Chaubey, Alexandre Detappe, Nishita Parnandi, Yizhou He, Xiao-Feng Zheng, Maria Victoria Botuyan and 8 more

Abstract read
In one paragraph

Article in Nature, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 88 papers.

0numbers the graph read from it
0cells of the map it votes in
88citing papers in PubMed
6.0field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

88 citing papers in PubMed, 124 citations in OpenAlex.

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28 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

18 authors at 8 institutions in 2 countries.

Pascal DranéDepartment of Radiation Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts 02115, USA.
Marie-Eve BraultDepartment of Radiation Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts 02115, USA.
Gaofeng CuiDepartment of Biochemistry and Molecular Biology, Mayo Clinic, Rochester, Minnesota 55905, USA.
Khyati MeghaniDepartment of Radiation Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts 02115, USA.
Shweta ChaubeyDepartment of Radiation Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts 02115, USA.
Alexandre DetappeDepartment of Radiation Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts 02115, USA.
Nishita ParnandiDepartment of Radiation Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts 02115, USA.
Yizhou HeDepartment of Radiation Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts 02115, USA.
Xiao-Feng ZhengDepartment of Radiation Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts 02115, USA.
Maria Victoria BotuyanDepartment of Biochemistry and Molecular Biology, Mayo Clinic, Rochester, Minnesota 55905, USA.
Alkmini KalousiInstitut de Génétique et de Biologie Moléculaire et Cellulaire (IGBMC), Illkirch 67404, France.
William T YewdellImmunology Program, Memorial Sloan-Kettering Cancer Center, Gerstner Sloan-Kettering Graduate School, New York, New York 10065, USA.
Christian MünchDepartment of Cell Biology, Harvard Medical School, Boston, Massachusetts 02115, USA.
J Wade HarperDepartment of Cell Biology, Harvard Medical School, Boston, Massachusetts 02115, USA.
Jayanta ChaudhuriImmunology Program, Memorial Sloan-Kettering Cancer Center, Gerstner Sloan-Kettering Graduate School, New York, New York 10065, USA.
Evi SoutoglouInstitut de Génétique et de Biologie Moléculaire et Cellulaire (IGBMC), Illkirch 67404, France.
Georges MerDepartment of Biochemistry and Molecular Biology, Mayo Clinic, Rochester, Minnesota 55905, USA.
Dipanjan ChowdhuryDepartment of Radiation Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts 02115, USA.
Dana-Farber Cancer Institute · USMayo Clinic · USHarvard University · USBroad Institute · USCornell University · USInstitut de Biologie Moléculaire et Cellulaire · FRInstitut de génétique et de biologie moléculaire et cellulaire · FRMemorial Sloan Kettering Cancer Center · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Nicholas D Socci · 1985 to 2026
$347.4M
Targeted MV-CEA as a Potent Antitumor Agent against GBMP50CA108961 · NCI · MAYO CLINIC ROCHESTER · PI O'NEILL, BRIAN PATRICK · 2004 to 2015
$22.5M
Ubiquitin Mediated Proteolysis and Cell Cycle ControlR01AG011085 · NIA · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI JEFFREY W HARPER · 1993 to 2026
$10.9M
Tumor Cell Biology Training ProgramT32CA009361 · NCI · DANA-FARBER CANCER INSTITUTE · PI GRAY, NATHANAEL SCHIANDER · 1985 to 2015
$8.9M
Mechanistic Elucidation of Class Switch Recombination and Somatic HypermutationR01AI072194 · NIAID · SLOAN-KETTERING INST CAN RESEARCH · PI CHAUDHURI, JAYANTA · 2009 to 2025
$6.9M
RNA-directed targeting of AID in immunity and genomic integrityR01AI124186 · NIAID · SLOAN-KETTERING INST CAN RESEARCH · PI Jayanta Chaudhuri · 2016 to 2026
$4.8M
Structural Biology of Lysine Methylation in DNA Damage and Checkpoint SignalingR01CA132878 · NCI · MAYO CLINIC ROCHESTER · PI Georges Mer · 2008 to 2026
$4.5M
IMMUNOLOGY RESEARCH TRAININGT32CA009149 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI RUDENSKY, ALEXANDER Y · 1985 to 2022
$4.0M
Molecular mechanism and relevance of microRNAs in DSB repair pathway choiceR01CA142698 · NCI · DANA-FARBER CANCER INST · PI CHOWDHURY, DIPANJAN · 2010 to 2019
$3.8M
Serum microRNA as biomarker for radiation injury to lung and hematopoietic cellsR01AI101897 · NIAID · DANA-FARBER CANCER INST · PI CHOWDHURY, DIPANJAN · 2012 to 2016
$2.1M
Structural basis of RNF168-mediated ubiquitin signaling at chromosomal DNA breaksR01GM116829 · NIGMS · MAYO CLINIC ROCHESTER · PI MER, GEORGES · 2015 to 2018
$1.3M
Mechanistic Elucidation of Class Switch Recombination and Somatic HypermutationR56AI072194 · NIAID · SLOAN-KETTERING INST CAN RESEARCH · PI CHAUDHURI, JAYANTA · 2020 to 2020
$531k
NCI NIH HHS 4T32CA009149-40NCI NIH HHS P30 CA008748NCI NIH HHS P50 CA108961NCI NIH HHS R01 CA132878NCI NIH HHS R01 CA142698NCI NIH HHS T32 CA009361NIAID NIH HHS R01 AI072194NIAID NIH HHS R01 AI101897NIAID NIH HHS R01 AI124186NIAID NIH HHS R56 AI072194NIA NIH HHS R01 AG011085NIGMS NIH HHS R01 GM116829
6 · The paper itself

Abstract

P53-binding protein 1 (53BP1) is a multi-functional double-strand break repair protein that is essential for class switch recombination in B lymphocytes and for sensitizing BRCA1-deficient tumours to poly-ADP-ribose polymerase-1 (PARP) inhibitors. Central to all 53BP1 activities is its recruitment to double-strand breaks via the interaction of the tandem Tudor domain with dimethylated lysine 20 of histone H4 (H4K20me2). Here we identify an uncharacterized protein, Tudor interacting repair regulator (TIRR), that directly binds the tandem Tudor domain and masks its H4K20me2 binding motif. Upon DNA damage, the protein kinase ataxia-telangiectasia mutated (ATM) phosphorylates 53BP1 and recruits RAP1-interacting factor 1 (RIF1) to dissociate the 53BP1-TIRR complex. However, overexpression of TIRR impedes 53BP1 function by blocking its localization to double-strand breaks. Depletion of TIRR destabilizes 53BP1 in the nuclear-soluble fraction and alters the double-strand break-induced protein complex centring 53BP1. These findings identify TIRR as a new factor that influences double-strand break repair using a unique mechanism of masking the histone methyl-lysine binding function of 53BP1.

Indexed as

AnimalsAtaxia Telangiectasia Mutated ProteinsBinding SitesCarrier ProteinsDNA Breaks, Double-StrandedDNA RepairFemaleHistonesHumansLysineMethylationMiceMice, Inbred C57BLPhosphorylationProtein BindingProtein DomainsAtaxia Telangiectasia Mutated ProteinsATM protein, humanCarrier ProteinsHistonesLysineNUDT16L1 protein, humanRif1 protein, humanRNA-Binding ProteinsTelomere-Binding ProteinsTP53BP1 protein, humanTumor Suppressor p53-Binding Protein 1

Identifiers

PMID28241136
PMCPMC5441565
OpenAlexW2593269879

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.