Evidence map›Paper›PMID 28241077›Full record

ArticlePloS one2017

α-amanitin resistance in Drosophila melanogaster: A genome-wide association approach.

Chelsea L Mitchell, Catrina E Latuszek, Kara R Vogel, Ian M Greenlund, Rebecca E Hobmeier, Olivia K Ingram, Shannon R Dufek, Jared L Pecore, Felicia R Nip, Zachary J Johnson and 4 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.2field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. The road less traveled: from genotype to phenotype in flies and humans.Mammalian genome : official journal of the International Mammalian Genome Society · 2018
    Article
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 1 country.

Chelsea L MitchellDepartment of Biological Sciences, Michigan Technological University, 1400 Townsend Dr., Houghton, MI, United States of America.
Catrina E LatuszekDepartment of Biological Sciences, Michigan Technological University, 1400 Townsend Dr., Houghton, MI, United States of America.
Kara R VogelDepartment of Neurology, University of Wisconsin School of Medicine and Public Health, 1300 University Ave., Madison, WI, United States of America.
Ian M GreenlundDepartment of Biological Sciences, Michigan Technological University, 1400 Townsend Dr., Houghton, MI, United States of America.
Rebecca E HobmeierDepartment of Biological Sciences, Michigan Technological University, 1400 Townsend Dr., Houghton, MI, United States of America.
Olivia K IngramDepartment of Biological Sciences, Michigan Technological University, 1400 Townsend Dr., Houghton, MI, United States of America.
Shannon R DufekDepartment of Biological Sciences, Michigan Technological University, 1400 Townsend Dr., Houghton, MI, United States of America.
Jared L PecoreDepartment of Biological Sciences, Michigan Technological University, 1400 Townsend Dr., Houghton, MI, United States of America.
Felicia R NipCollege of Human Medicine, Michigan State University, Clinical Center, East Lansing, MI, United States of America.
Zachary J JohnsonU.S. Forest Service, Salt Lake Ranger District 6944 S, 3000 E, Salt Lake City, UT, United States of America.
Xiaohui JiSchool of Forest Resources and Environmental Sciences, Michigan Technological University, 1400 Townsend Dr., Houghton, MI, United States of America.
Hairong WeiSchool of Forest Resources and Environmental Sciences, Michigan Technological University, 1400 Townsend Dr., Houghton, MI, United States of America.
Oliver GailingSchool of Forest Resources and Environmental Sciences, Michigan Technological University, 1400 Townsend Dr., Houghton, MI, United States of America.
Thomas WernerDepartment of Biological Sciences, Michigan Technological University, 1400 Townsend Dr., Houghton, MI, United States of America.ORCID http://orcid.org/0000-0002-8865-365X
Michigan Technological University · USMichigan State University · USUniversity of Wisconsin–Madison · USUS Forest Service · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We investigated the mechanisms of mushroom toxin resistance in the Drosophila Genetic Reference Panel (DGRP) fly lines, using genome-wide association studies (GWAS). While Drosophila melanogaster avoids mushrooms in nature, some lines are surprisingly resistant to α-amanitin-a toxin found solely in mushrooms. This resistance may represent a pre-adaptation, which might enable this species to invade the mushroom niche in the future. Although our previous microarray study had strongly suggested that pesticide-metabolizing detoxification genes confer α-amanitin resistance in a Taiwanese D. melanogaster line Ama-KTT, none of the traditional detoxification genes were among the top candidate genes resulting from the GWAS in the current study. Instead, we identified Megalin, Tequila, and widerborst as candidate genes underlying the α-amanitin resistance phenotype in the North American DGRP lines, all three of which are connected to the Target of Rapamycin (TOR) pathway. Both widerborst and Tequila are upstream regulators of TOR, and TOR is a key regulator of autophagy and Megalin-mediated endocytosis. We suggest that endocytosis and autophagy of α-amanitin, followed by lysosomal degradation of the toxin, is one of the mechanisms that confer α-amanitin resistance in the DGRP lines.

Indexed as

Drug ResistanceAlpha-AmanitinAnimalsCrosses, GeneticDrosophila melanogasterDrosophila ProteinsEndocytosisGene Expression ProfilingGene Expression RegulationGenetic Association StudiesGenetic VariationLarvaLow Density Lipoprotein Receptor-Related Protein-2Oligonucleotide Array Sequence AnalysisPesticidesPhenotypeAlpha-AmanitinDrosophila ProteinsLow Density Lipoprotein Receptor-Related Protein-2PesticidesRNATOR Serine-Threonine Kinases

Identifiers

PMID28241077
PMCPMC5328632
OpenAlexW2594744042

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.