Evidence map›Paper›PMID 28241045›Full record

ArticlePloS one2017

Effects upon metabolic pathways and energy production by Sb(III) and As(III)/Sb(III)-oxidase gene aioA in Agrobacterium tumefaciens GW4.

Jingxin Li, Birong Yang, Manman Shi, Kai Yuan, Wei Guo, Mingshun Li, Gejiao Wang

Abstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
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  7. High-quality-draft genomic sequence ofStandards in genomic sciences · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Jingxin LiState Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan, P. R. China.
Birong YangState Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan, P. R. China.
Manman ShiState Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan, P. R. China.
Kai YuanState Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan, P. R. China.
Wei GuoState Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan, P. R. China.
Mingshun LiState Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan, P. R. China.
Gejiao WangState Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan, P. R. China.ORCID http://orcid.org/0000-0001-8647-7528

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Agrobacterium tumefaciens GW4 is a heterotrophic arsenite [As(III)]/antimonite [Sb(III)]-oxidizing strain. The As(III) oxidase AioAB is responsible for As(III) oxidation in the periplasm and it is also involved in Sb(III) oxidation in Agrobacterium tumefaciens 5A. In addition, Sb(III) oxidase AnoA and cellular H2O2 are also responsible for Sb(III) oxidation in strain GW4. However, the deletion of aioA increased the Sb(III) oxidation efficiency in strain GW4. In the present study, we found that the cell mobility to Sb(III), ATP and NADH contents and heat release were also increased by Sb(III) and more significantly in the aioA mutant. Proteomics and transcriptional analyses showed that proteins/genes involved in Sb(III) oxidation and resistance, stress responses, carbon metabolism, cell mobility, phosphonate and phosphinate metabolism, and amino acid and nucleotide metabolism were induced by Sb(III) and were more significantly induced in the aioA mutant. The results suggested that Sb(III) oxidation may produce energy. In addition, without periplasmic AioAB, more Sb(III) would enter bacterial cells, however, the cytoplasmic AnoA and the oxidative stress response proteins were significantly up-regulated, which may contribute to the increased Sb(III) oxidation efficiency. Moreover, the carbon metabolism was also activated to generate more energy against Sb(III) stress. The generated energy may be used in Sb transportation, DNA repair, amino acid synthesis, and cell mobility, and may be released in the form of heat.

Indexed as

Agrobacterium tumefaciensAmino AcidsAntimonyArsenitesBacterial ProteinsCarbonDNA RepairGene DeletionHydrogen PeroxideMetabolic Networks and PathwaysMutationNADOrganophosphonatesOxidation-ReductionOxidoreductasesOxygenAmino AcidsantimoniteAntimonyarseniteArsenitesBacterial ProteinsCarbonHydrogen PeroxideNADOrganophosphonatesOxidoreductasesOxygenPhosphates

Identifiers

PMID28241045
PMCPMC5328403

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.