Evidence map›Paper›PMID 28241009›Full record

ArticlePloS one2017

Engineering of mCherry variants with long Stokes shift, red-shifted fluorescence, and low cytotoxicity.

Yi Shen, Yingche Chen, Jiahui Wu, Nathan C Shaner, Robert E Campbell

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
9.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 105 citations in OpenAlex.

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  15. Selectivity of Complex Coacervation in Multi-Protein Mixtures.bioRxiv : the preprint server for biology · 2024
    Article
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  19. Enhancing chimeric antigen receptor T cell therapy by modulating the p53 signaling network with Δ133p53α.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  20. Direct measurement of dynamic attractant gradients reveals breakdown of the Patlak-Keller-Segel chemotaxis model.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Yi ShenDepartment of Chemistry, University of Alberta, Edmonton, Alberta, Canada.
Yingche ChenDepartment of Chemistry, University of Alberta, Edmonton, Alberta, Canada.
Jiahui WuDepartment of Chemistry, University of Alberta, Edmonton, Alberta, Canada.
Nathan C ShanerDepartment of Photobiology and Bioimaging, The Scintillon Institute, San Diego, California, United States of America.
Robert E CampbellDepartment of Chemistry, University of Alberta, Edmonton, Alberta, Canada.
University of Alberta · CAScintillon Institute · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

MCherry, the Discosoma sp. mushroom coral-derived monomeric red fluorescent protein (RFP), is a commonly used genetically encoded fluorophore for live cell fluorescence imaging. We have used a combination of protein design and directed evolution to develop mCherry variants with low cytotoxicity to Escherichia coli and altered excitation and emission profiles. These efforts ultimately led to a long Stokes shift (LSS)-mCherry variant (λex = 460 nm and λem = 610 nm) and a red-shifted (RDS)-mCherry variant (λex = 600 nm and λem = 630 nm). These new RFPs provide insight into the influence of the chromophore environment on mCherry's fluorescence properties, and may serve as templates for the future development of fluorescent probes for live cell imaging.

Indexed as

Models, MolecularAnimalsAnthozoaEscherichia coliEvolution, MolecularFluorescenceFluorescent DyesGene LibraryLuminescent ProteinsMutagenesis, Site-DirectedOligonucleotidesProtein EngineeringRed Fluorescent ProteinFluorescent DyesLuminescent ProteinsOligonucleotidesRed Fluorescent Protein

Identifiers

PMID28241009
PMCPMC5328254
OpenAlexW2593007003

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.