Evidence map›Paper›PMID 28240605›Full record

ArticleThe Journal of clinical investigation2017

Targeting PPARγ in the epigenome rescues genetic metabolic defects in mice.

Raymond E Soccio, Zhenghui Li, Eric R Chen, Yee Hoon Foong, Kiara K Benson, Joanna R Dispirito, Shannon E Mullican, Matthew J Emmett, Erika R Briggs, Lindsey C Peed and 11 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of clinical investigation, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
3.7field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 54 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. NFIA determines theiScience · 2022
    Article
  11. Article
  12. Article
  13. Article
  14. Characterization of anNutrients · 2021
    Article
  15. Genetic controls of Tas1r3-independent sucrose consumption in mice.Mammalian genome : official journal of the International Mammalian Genome Society · 2021
    Article
  16. Genetics of mouse behavioral and peripheral neural responses to sucrose.Mammalian genome : official journal of the International Mammalian Genome Society · 2021
    Article
  17. Article
  18. American journal of physiology. Endocrinology and metabolism · 2020
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 2 institutions in 3 countries.

Raymond E Soccio
Zhenghui Li
Eric R Chen
Yee Hoon Foong
Kiara K Benson
Joanna R Dispirito
Shannon E Mullican
Matthew J Emmett
Erika R Briggs
Lindsey C Peed
Richard K Dzeng
Carlos J Medina
Jennifer F Jolivert
Megan Kissig
Satyajit R Rajapurkar
Manashree Damle
Hee-Woong Lim
Kyoung-Jae Won
Patrick Seale
David J Steger
Mitchell A Lazar
Diabetes Australia · AUInstitute of Nutrition, Metabolism and Diabetes · CA

Funding

VIRAL VECTOR COREP30DK019525 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI KLAUS H KAESTNER · 1986 to 2026
$48.3M
Nuclear Receptors in Metabolic TissuesR01DK049780 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI LAZAR, MITCHELL A. · 1995 to 2025
$10.8M
Transcriptional and epigenomic control of adipose tissue development and functionR01DK098542 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI STEGER, DAVID J. · 2013 to 2017
$1.7M
Tracing transcriptomic changes to uncover unknown roles of TZDsR01DK106027 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI SEALE, PATRICK, WON, KYOUNG JAE · 2015 to 2019
$1.7M
Regulation of brown and beige adipocyte development through Ebf2R01DK103008 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI SEALE, PATRICK · 2014 to 2017
$1.4M
Translating human PPARy binding regions to gene regulation and metabolic diseaseK08DK094968 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI SOCCIO, RAYMOND EDWARD · 2012 to 2016
$775k
Control of Brown Adipose Physiology Via Genomic Recruitment of Histone Deacetylase 3F30DK104513 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI EMMETT, MATTHEW J · 2014 to 2016
$106k
NIDDK NIH HHS F30 DK104513NIDDK NIH HHS K08 DK094968NIDDK NIH HHS P30 DK019525NIDDK NIH HHS R01 DK049780NIDDK NIH HHS R01 DK098542NIDDK NIH HHS R01 DK103008NIDDK NIH HHS R01 DK106027
6 · The paper itself

Abstract

Obesity causes insulin resistance, and PPARγ ligands such as rosiglitazone are insulin sensitizing, yet the mechanisms remain unclear. In C57BL/6 (B6) mice, obesity induced by a high-fat diet (HFD) has major effects on visceral epididymal adipose tissue (eWAT). Here, we report that HFD-induced obesity in B6 mice also altered the activity of gene regulatory elements and genome-wide occupancy of PPARγ. Rosiglitazone treatment restored insulin sensitivity in obese B6 mice, yet, surprisingly, had little effect on gene expression in eWAT. However, in subcutaneous inguinal fat (iWAT), rosiglitazone markedly induced molecular signatures of brown fat, including the key thermogenic gene Ucp1. Obesity-resistant 129S1/SvImJ mice (129 mice) displayed iWAT browning, even in the absence of rosiglitazone. The 129 Ucp1 locus had increased PPARγ binding and gene expression that were preserved in the iWAT of B6x129 F1-intercrossed mice, with an imbalance favoring the 129-derived alleles, demonstrating a cis-acting genetic difference. Thus, B6 mice have genetically defective Ucp1 expression in iWAT. However, when Ucp1 was activated by rosiglitazone, or by iWAT browning in cold-exposed or young mice, expression of the B6 version of Ucp1 was no longer defective relative to the 129 version, indicating epigenomic rescue. These results provide a framework for understanding how environmental influences like drugs can affect the epigenome and potentially rescue genetically determined disease phenotypes.

Indexed as

Epigenesis, GeneticAnimalsDiet, High-FatHypoglycemic AgentsIntra-Abdominal FatMaleMice, 129 StrainMice, Inbred C57BLObesityPPAR gammaProtein BindingRegulatory Elements, TranscriptionalRosiglitazoneSubcutaneous Fat, AbdominalThiazolidinedionesTranscriptional ActivationHypoglycemic AgentsPPAR gammaRosiglitazoneThiazolidinedionesUcp1 protein, mouseUncoupling Protein 1

Identifiers

PMID28240605
PMCPMC5373865
OpenAlexW2590455134

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.