Evidence map›Paper›PMID 28238794›Full record

ArticleStem cell reports2017

Efficient Precision Genome Editing in iPSCs via Genetic Co-targeting with Selection.

Katie A Mitzelfelt, Chris McDermott-Roe, Michael N Grzybowski, Maribel Marquez, Chieh-Ti Kuo, Michael Riedel, Shuping Lai, Melinda J Choi, Kurt D Kolander, Daniel Helbling and 7 more

Abstract read
In one paragraph

Article in Stem cell reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Enrichment strategies to enhance genome editing.Journal of biomedical science · 2023
    Review
  6. Article
  7. Selecting for CRISPR-Edited Knock-In Cells.International journal of molecular sciences · 2022
    Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Contractility of Induced Pluripotent Stem Cell-Cardiomyocytes With anFrontiers in cell and developmental biology · 2020
    Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Katie A MitzelfeltDepartment of Biochemistry, University of Utah, Salt Lake City, UT 84112, USA.
Chris McDermott-RoeCardiovascular Center, Medical College of Wisconsin, Milwaukee, WI 53226, USA; Department of Physiology, Medical College of Wisconsin, Milwaukee, WI 53226, USA. Electronic address: mcdec@mail.med.upenn.edu.
Michael N GrzybowskiCardiovascular Center, Medical College of Wisconsin, Milwaukee, WI 53226, USA; Department of Physiology, Medical College of Wisconsin, Milwaukee, WI 53226, USA.
Maribel MarquezCardiovascular Center, Medical College of Wisconsin, Milwaukee, WI 53226, USA; Department of Physiology, Medical College of Wisconsin, Milwaukee, WI 53226, USA.
Chieh-Ti KuoCardiovascular Center, Medical College of Wisconsin, Milwaukee, WI 53226, USA.
Michael RiedelPharmaCell, 6229 Maastricht, the Netherlands.
Shuping LaiCardiovascular Center, Medical College of Wisconsin, Milwaukee, WI 53226, USA.
Melinda J ChoiCardiovascular Center, Medical College of Wisconsin, Milwaukee, WI 53226, USA.
Kurt D KolanderCardiovascular Center, Medical College of Wisconsin, Milwaukee, WI 53226, USA.
Daniel HelblingDivision of Genetics, Department of Pediatrics, Human Molecular Genetics Center, Medical College of Wisconsin, Milwaukee, WI 53226, USA.
David P DimmockDivision of Genetics, Department of Pediatrics, Human Molecular Genetics Center, Medical College of Wisconsin, Milwaukee, WI 53226, USA.
Michele A BattleDepartment of Cell Biology, Neurobiology and Anatomy, Medical College of Wisconsin, Milwaukee, WI 53226, USA.
Chuanchau J JouNora Eccles Harrison CVRTI, University of Utah School of Medicine, Salt Lake City, UT 84112, USA; Division of Pediatric Cardiology, University of Utah School of Medicine, Salt Lake City, UT 83113, USA.
Martin Tristani-FirouziNora Eccles Harrison CVRTI, University of Utah School of Medicine, Salt Lake City, UT 84112, USA; Division of Pediatric Cardiology, University of Utah School of Medicine, Salt Lake City, UT 83113, USA.
James W VerbskySection of Quantitative Health Sciences, Department of Pediatrics, Medical College of Wisconsin, Milwaukee, WI 53226, USA.
Ivor J BenjaminDepartment of Biochemistry, University of Utah, Salt Lake City, UT 84112, USA; Cardiovascular Center, Medical College of Wisconsin, Milwaukee, WI 53226, USA.
Aron M GeurtsCardiovascular Center, Medical College of Wisconsin, Milwaukee, WI 53226, USA; Department of Physiology, Medical College of Wisconsin, Milwaukee, WI 53226, USA. Electronic address: ageurts@mcw.edu.

Funding

INTEGRATED PHYSIOLOGY TRAINING--MOLECULE TO ORGANISMT32HL007852 · NHLBI · MEDICAL COLLEGE OF WISCONSIN · PI Matthew Robert Hodges · 1996 to 2026
$6.5M
Advanced genetic engineering technology developmentDP2OD008396 · OD · MEDICAL COLLEGE OF WISCONSIN · PI GEURTS, ARON M · 2011 to 2011
$2.3M
Determining the mechanisms regulating functional regionalization of the intestineR56DK087873 · NIDDK · MEDICAL COLLEGE OF WISCONSIN · PI BATTLE, MICHELE A · 2016 to 2016
$128k
Modeling Inheritable Myofibrillar Myopathy with Patient-Specific iPS CellsF31AR067618 · NIAMS · UNIVERSITY OF UTAH · PI MITZELFELT, KATIE ANN · 2015 to 2016
$42k
NHLBI NIH HHS T32 HL007852NIAMS NIH HHS F31 AR067618NIDDK NIH HHS R56 DK087873NIH HHS DP2 OD008396
6 · The paper itself

Abstract

Genome editing in induced pluripotent stem cells is currently hampered by the laborious and expensive nature of identifying homology-directed repair (HDR)-modified cells. We present an approach where isolation of cells bearing a selectable, HDR-mediated editing event at one locus enriches for HDR-mediated edits at additional loci. This strategy, called co-targeting with selection, improves the probability of isolating cells bearing HDR-mediated variants and accelerates the production of disease models.

Indexed as

Gene EditingGene TargetingGenome, HumanCell LineCRISPR-Cas SystemsDNA End-Joining RepairGene Knock-In TechniquesGenetic VectorsHigh-Throughput Nucleotide SequencingHumansInduced Pluripotent Stem CellsRecombinational DNA Repair

Identifiers

PMID28238794
PMCPMC5355643

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.