Evidence map›Paper›PMID 28238781›Full record

ArticleBiochemical and biophysical research communications2017

Caspofungin exposure alters the core septin AspB interactome of Aspergillus fumigatus.

José M Vargas-Muñiz, Hilary Renshaw, Greg Waitt, Erik J Soderblom, M Arthur Moseley, Jonathan M Palmer, Praveen R Juvvadi, Nancy P Keller, William J Steinbach

Open access · greenAbstract read
In one paragraph

Article in Biochemical and biophysical research communications, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.6field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

José M Vargas-MuñizDepartment of Molecular Genetics and Microbiology, Duke University Medical Center, Durham, NC, United States.
Hilary RenshawDepartment of Molecular Genetics and Microbiology, Duke University Medical Center, Durham, NC, United States.
Greg WaittDuke Proteomics and Metabolomics Core Facility, Center for Genomic and Computational Biology, Duke University, Durham, NC, United States.
Erik J SoderblomDuke Proteomics and Metabolomics Core Facility, Center for Genomic and Computational Biology, Duke University, Durham, NC, United States.
M Arthur MoseleyDuke Proteomics and Metabolomics Core Facility, Center for Genomic and Computational Biology, Duke University, Durham, NC, United States.
Jonathan M PalmerU.S. Forest Service, Northern Research Station, Center for Forest Mycology Research, Madison, WI, United States; Department of Medical Microbiology and Immunology, University of Wisconsin-Madison, Madison, WI, United States.
Praveen R JuvvadiDivision of Pediatric Infectious Diseases, Department of Pediatrics, Duke University Medical Center, Durham, NC, United States.
Nancy P KellerDepartment of Medical Microbiology and Immunology, University of Wisconsin-Madison, Madison, WI, United States.
William J SteinbachDepartment of Molecular Genetics and Microbiology, Duke University Medical Center, Durham, NC, United States; Division of Pediatric Infectious Diseases, Department of Pediatrics, Duke University Medical Center, Durham, NC, United States. Electronic address: bill.steinbach@duke.edu.
Duke University · USDuke Medical Center · USUniversity of Wisconsin–Madison · USUS Forest Service · US

Funding

Mechanisms of an Aspergillus fumigatus virulence mutantR01AI065728 · NIAID · UNIVERSITY OF WISCONSIN-MADISON · PI KELLER, NANCY P · 2006 to 2017
$3.6M
Structural Biological Development of Fungal-Specific Calcineurin InhibitorsR01AI112595 · NIAID · DUKE UNIVERSITY · PI HEITMAN, JOSEPH, SCHUMACHER, MARIA · 2014 to 2017
$2.5M
NIAID NIH HHS R01 AI065728NIAID NIH HHS R01 AI112595
6 · The paper itself

Abstract

Aspergillus fumigatus, the main etiological agent of invasive aspergillosis, is a leading cause of death in immunocompromised patients. Septins, a conserved family of GTP-binding proteins, serve as scaffolding proteins to recruit enzymes and key regulators to different cellular compartments. Deletion of the A. fumigatus septin aspB increases susceptibility to the echinocandin antifungal caspofungin. However, how AspB mediates this response to caspofungin is unknown. Here, we characterized the AspB interactome under basal conditions and after exposure to a clinically relevant concentration of caspofungin. While A. fumigatus AspB interacted with 334 proteins, including kinases, cell cycle regulators, and cell wall synthesis-related proteins under basal growth conditions, caspofungin exposure altered AspB interactions. A total of 69 of the basal interactants did not interact with AspB after exposure to caspofungin, and 54 new interactants were identified following caspofungin exposure. We generated A. fumigatus deletion strains for 3 proteins (ArpB, Cyp4, and PpoA) that only interacted with AspB following exposure to caspofungin that were previously annotated as induced after exposure to antifungal agents, yet only PpoA was implicated in the response to caspofungin. Taken together, we defined how the septin AspB interactome is altered in the presence of a clinically relevant antifungal.

Indexed as

Antifungal AgentsAspergillosisAspergillus fumigatusCaspofunginEchinocandinsFungal ProteinsGene DeletionHumansLipopeptidesProtein Interaction MapsSeptinsAntifungal AgentsCaspofunginEchinocandinsFungal ProteinsLipopeptidesSeptinsAspBAspergillus fumigatusCaspofunginInteractomeSeptins

Identifiers

PMID28238781
PMCPMC5384791
OpenAlexW2589745292

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.