Evidence map›Paper›PMID 28237556›Full record

ArticleBioorganic & medicinal chemistry2017

In vivo instability of platensimycin and platencin: Synthesis and biological evaluation of urea- and carbamate-platensimycin.

Liao-Bin Dong, Jeffrey D Rudolf, Li Lin, Claudia Ruiz, Michael D Cameron, Ben Shen

Abstract read
In one paragraph

Article in Bioorganic & medicinal chemistry, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Review
  2. Review
  3. Review
  4. Article
  5. Article
  6. Bacterial terpenome.Natural product reports · 2021
    Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Liao-Bin DongDepartment of Chemistry, The Scripps Research Institute, 130 Scripps Way, Jupiter, FL 33458, United States.
Jeffrey D RudolfDepartment of Chemistry, The Scripps Research Institute, 130 Scripps Way, Jupiter, FL 33458, United States.
Li LinDepartment of Molecular Medicine, The Scripps Research Institute, 130 Scripps Way, Jupiter, FL 33458, United States.
Claudia RuizDepartment of Molecular Medicine, The Scripps Research Institute, 130 Scripps Way, Jupiter, FL 33458, United States.
Michael D CameronDepartment of Molecular Medicine, The Scripps Research Institute, 130 Scripps Way, Jupiter, FL 33458, United States. Electronic address: cameron@scripps.edu.
Ben ShenDepartment of Chemistry, The Scripps Research Institute, 130 Scripps Way, Jupiter, FL 33458, United States; Department of Molecular Medicine, The Scripps Research Institute, 130 Scripps Way, Jupiter, FL 33458, United States; Natural Products Library Initiative at The Scripps Research Institute, The Scripps Research Institute, 130 Scripps Way, Jupiter, FL 33458, United States. Electronic address: shenb@scripps.edu.

Funding

Discovery and biosynthesis of diterpenoid natural products in actinomycetalsR01GM114353 · NIGMS · SCRIPPS FLORIDA · PI SHEN, BEN · 2016 to 2019
$1.8M
Mass spectrometry for small molecule profiling in the Scripps Florida DMPK coreS10OD010603 · OD · SCRIPPS FLORIDA · PI CAMERON, MICHAEL DARIN · 2013 to 2013
$461k
Platnesimycin and platencin biosynthesis and engineering in antibacterial drugsR56AI079070 · NIAID · UNIVERSITY OF WISCONSIN-MADISON · PI SHEN, BEN · 2010 to 2010
$363k
NIAID NIH HHS R56 AI079070NIGMS NIH HHS R01 GM114353NIH HHS S10 OD010603
6 · The paper itself

Abstract

Platensimycin (PTM) and platencin (PTN), two natural products and promising drug leads that target bacterial and mammalian fatty acid synthases, are known to have unfavorable pharmacokinetic properties. It is not clear, however, what the metabolic fates of PTM and PTN are and no efforts have been reported to address this key roadblock in the development of these compounds as viable drug options. Here we describe the pharmacokinetics of PTM and PTN, and reveal rapid renal clearance as the primary metabolic liability with three additional sites of chemical liability: (i) amide hydrolysis, (ii) glucuronidation, and (iii) oxidation. We determined that hydrolysis is a viable clearance mechanism in vivo and synthesized two PTM analogues to address in vivo hydrolysis. Urea- and carbamate-PTM analogues showed no detectable hydrolysis in vivo, at the expense of antibacterial activity, with no further improvement in systemic exposure. The antibacterial sulfur-containing analogues PTM D1 and PTM ML14 showed significant decreases in renal clearance. These studies set the stage for continued generation of PTM and PTN analogues in an effort to improve their pharmacokinetics while retaining or improving their biological activities.

Indexed as

AdamantaneAminobenzoatesAminophenolsAnilidesAnimalsAnti-Bacterial AgentsCarbamatesCarbon-13 Magnetic Resonance SpectroscopyMiceMice, Inbred C57BLPolycyclic CompoundsProton Magnetic Resonance SpectroscopyUreaAdamantaneAminobenzoatesAminophenolsAnilidesAnti-Bacterial AgentsCarbamatesplatencinplatensimycinPolycyclic CompoundsUreaAmide hydrolysisFatty acid synthase inhibitorsNatural productsPlatencinPlatensimycinUrea and carbamate analogues

Identifiers

PMID28237556
PMCPMC5421316

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.