Evidence map›Paper›PMID 28235824›Full record

ArticleG3 (Bethesda, Md.)2017

A Nonsense Variant in the

Anina Bauer, Theresa Hiemesch, Vidhya Jagannathan, Markus Neuditschko, Iris Bachmann, Stefan Rieder, Sofia Mikko, M Cecilia Penedo, Nadja Tarasova, Martina Vitková and 4 more

Open access · goldAbstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 16 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 7 institutions in 5 countries.

Anina BauerInstitute of Genetics, Vetsuisse Faculty, University of Bern, 3001, Switzerland.ORCID 0000-0002-6765-4012
Theresa HiemeschInstitute of Genetics, Vetsuisse Faculty, University of Bern, 3001, Switzerland.
Vidhya JagannathanInstitute of Genetics, Vetsuisse Faculty, University of Bern, 3001, Switzerland.
Markus NeuditschkoSwiss Competence Center of Animal Breeding and Genetics, Bern University of Applied Sciences HAFL & Agroscope, University of Bern, 3001, Switzerland.
Iris BachmannSwiss Competence Center of Animal Breeding and Genetics, Bern University of Applied Sciences HAFL & Agroscope, University of Bern, 3001, Switzerland.
Stefan RiederSwiss Competence Center of Animal Breeding and Genetics, Bern University of Applied Sciences HAFL & Agroscope, University of Bern, 3001, Switzerland.
Sofia MikkoDepartment of Animal Breeding and Genetics, Swedish University of Agricultural Sciences, 75007 Uppsala, Sweden.
M Cecilia PenedoVeterinary Genetics Laboratory, School of Veterinary Medicine, University of California, Davis, California 95616.
Nadja TarasovaRussian Akhal-Teke Association, 115470 Moscow, Russia.
Martina VitkováEquine Veterinary Practice, 91601 Stará Turá, Slovakia.
Nicolò SirtoriEquine Veterinary Practice, 29010 Agazzano, Italy.
Paola RoccabiancaDepartment of Veterinary Medicine, University of Milan, 20133, Italy.
Tosso LeebInstitute of Genetics, Vetsuisse Faculty, University of Bern, 3001, Switzerland Tosso.Leeb@vetsuisse.unibe.ch.ORCID 0000-0003-0553-4880
Monika M WelleDermFocus, University of Bern, 3001, Switzerland.
University of Bern · CHAgroscope · CHBern University of Applied Sciences · CHSwedish University of Agricultural Sciences · SEUniversity of California, Davis · USUniversity of Göttingen · DEUniversity of Milan · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Naked foal syndrome (NFS) is a genodermatosis in the Akhal-Teke horse breed. We provide the first scientific description of this phenotype. Affected horses have almost no hair and show a mild ichthyosis. So far, all known NFS affected horses died between a few weeks and 3 yr of age. It is not clear whether a specific pathology caused the premature deaths. NFS is inherited as a monogenic autosomal recessive trait. We mapped the disease causing genetic variant to two segments on chromosomes 7 and 27 in the equine genome. Whole genome sequencing of two affected horses, two obligate carriers, and 75 control horses from other breeds revealed a single nonsynonymous genetic variant on the chromosome 7 segment that was perfectly associated with NFS. The affected horses were homozygous for

Indexed as

AnimalsBase SequenceChromosome MappingCodon, NonsenseFemaleGenetic LinkageGenetic Predisposition to DiseaseHeterozygoteHorse DiseasesHorsesMalePhenotypeRNA, MessengerSequence Analysis, DNASyndromeTumor Suppressor ProteinsCodon, NonsenseRNA, MessengerTumor Suppressor ProteinsdermatologyEquus caballusgenodermatosishairskinwhole genome sequencing

Identifiers

PMID28235824
PMCPMC5386879
OpenAlexW2589139490

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.