Evidence map›Paper›PMID 28235406›Full record

ArticleBMC systems biology2017

Network topology of NaV1.7 mutations in sodium channel-related painful disorders.

Dimos Kapetis, Jenny Sassone, Yang Yang, Barbara Galbardi, Markos N Xenakis, Ronald L Westra, Radek Szklarczyk, Patrick Lindsey, Catharina G Faber, Monique Gerrits and 6 more

Abstract read
In one paragraph

Article in BMC systems biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Shaping the Action Potential in Dorsal Root and Trigeminal Ganglia Neurons: Relevance to Pain Mechanisms.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2026
    Review
  2. Article
  3. Calculation of centralities in protein kinase A.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Dimos KapetisBioinformatics Unit, IRCCS Foundation "Carlo Besta" Neurological Institute, Milan, Italy. dimos.kapetis@gmail.com.
Jenny SassoneNeuroalgology Unit, IRCCS Foundation "Carlo Besta" Neurological Institute, Milan, Italy.
Yang YangDepartment of Neurology, Yale University School of Medicine, New Haven, USA.
Barbara GalbardiBioinformatics Unit, IRCCS Foundation "Carlo Besta" Neurological Institute, Milan, Italy.
Markos N XenakisDepartment of Clinical Genetics, Maastricht University Medical Center, Maastricht, The Netherlands.
Ronald L WestraDepartment of Clinical Genetics, Maastricht University Medical Center, Maastricht, The Netherlands.
Radek SzklarczykDepartment of Clinical Genetics, Maastricht University Medical Center, Maastricht, The Netherlands.
Patrick LindseyDepartment of Clinical Genetics, Maastricht University Medical Center, Maastricht, The Netherlands.
Catharina G FaberDepartment of Clinical Genetics, Maastricht University Medical Center, Maastricht, The Netherlands.
Monique GerritsDepartment of Clinical Genetics, Maastricht University Medical Center, Maastricht, The Netherlands.
Ingemar S J MerkiesDepartment of Neurology, Maastricht University Medical Center, Maastricht, The Netherlands.
Sulayman D Dib-HajjDepartment of Neurology, Yale University School of Medicine, New Haven, USA.
Massimo MantegazzaLaboratory of Excellence Ion Channel Science and Therapeutics, Institute of Molecular and Cellular Pharmacology, CNRS UMR7275 & University of Nice-Sophia Antipolis, Valbonne, France.
Stephen G WaxmanDepartment of Neurology, Yale University School of Medicine, New Haven, USA.
Giuseppe LauriaNeuroalgology Unit, IRCCS Foundation "Carlo Besta" Neurological Institute, Milan, Italy.
PROPANE Study Group

Funding

Yale Clinical and Translational Science Award (U Component)UL1TR001863 · NCATS · YALE UNIVERSITY · PI John H. Krystal, LUCILA OHNO-MACHADO · 2016 to 2026
$102.9M
NCATS NIH HHS UL1 TR001863
6 · The paper itself

Abstract

backgroundGain-of-function mutations in SCN9A gene that encodes the voltage-gated sodium channel NaV1.7 have been associated with a wide spectrum of painful syndromes in humans including inherited erythromelalgia, paroxysmal extreme pain disorder and small fibre neuropathy. These mutations change the biophysical properties of NaV1.7 channels leading to hyperexcitability of dorsal root ganglion nociceptors and pain symptoms. There is a need for better understanding of how gain-of-function mutations alter the atomic structure of Nav1.7.

resultsWe used homology modeling to build an atomic model of NaV1.7 and a network-based theoretical approach, which can predict interatomic interactions and connectivity arrangements, to investigate how pain-related NaV1.7 mutations may alter specific interatomic bonds and cause connectivity rearrangement, compared to benign variants and polymorphisms. For each amino acid substitution, we calculated the topological parameters betweenness centrality (B

conclusionsOur in-silico analyses predict that pain-related pathogenic NaV1.7 mutations may affect the network topological properties of the protein and suggest |ΔB

Indexed as

MutationProtein Interaction MappingComputational BiologyHumansModels, MolecularMutagenesisNAV1.7 Voltage-Gated Sodium ChannelPainPolymorphism, Single NucleotideProtein ConformationNAV1.7 Voltage-Gated Sodium ChannelNetwork analysisNeuropathic painSodium channelStructural modeling

Identifiers

PMID28235406
PMCPMC5324268

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.