Evidence map›Paper›PMID 28235049›Full record

ArticlePloS one2017

Aptamers provide superior stainings of cellular receptors studied under super-resolution microscopy.

Maria Angela Gomes de Castro, Claudia Höbartner, Felipe Opazo

Open access · goldAbstract readComparative Study
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 56 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. In vitro selection of aptamers and their applications.Nature reviews. Methods primers · 2023
    Article
  5. Article
  6. Review
  7. Article
  8. RNA aptamers for AMPA receptors.Neuropharmacology · 2021
    Review
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Review
  16. Review
  17. The Decade of Super-Resolution Microscopy of the Presynapse.Frontiers in synaptic neuroscience · 2020
    Review
  18. Article
  19. Updates on Aptamer Research.International journal of molecular sciences · 2019
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Maria Angela Gomes de CastroInstitute of Neuro- and Sensory Physiology, University Medical Center Göttingen, Göttingen, Germany.ORCID http://orcid.org/0000-0002-2679-6102
Claudia HöbartnerInstitute for Organic and Biomolecular Chemistry, Georg-August-University, Göttingen, Germany.
Felipe OpazoInstitute of Neuro- and Sensory Physiology, University Medical Center Göttingen, Göttingen, Germany.ORCID http://orcid.org/0000-0002-4968-9713
Universitätsmedizin Göttingen · DEUniversity of Göttingen · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Continuous improvements in imaging techniques are challenging biologists to search for more accurate methods to label cellular elements. This is particularly relevant for diffraction-unlimited fluorescence imaging, where the perceived resolution is affected by the size of the affinity probes. This is evident when antibodies, which are 10-15 nm in size, are used. Previously it has been suggested that RNA aptamers (~3 nm) can be used to detect cellular proteins under super-resolution imaging. However, a direct comparison between several aptamers and antibodies is needed, to clearly show the advantages and/or disadvantages of the different probes. Here we have conducted such a comparative study, by testing several aptamers and antibodies using stimulated emission depletion microscopy (STED). We have targeted three membrane receptors, EGFR, ErbB2 and Epha2, which are relevant to human health, and recycle between plasma membrane and intracellular organelles. Our results suggest that the aptamers can reveal more epitopes than most antibodies, thus providing a denser labeling of the stained structures. Moreover, this improves the overall quality of the information that can be extracted from the images. We conclude that aptamers could become useful fluorescent labeling tools for light microscopy and super-resolution imaging, and that their development for novel targets is imperative.

Indexed as

AntibodiesAntibody AffinityAptamers, NucleotideEndocytosisEpitopesErb-b2 Receptor Tyrosine KinasesErbB ReceptorsFluorescent Antibody Technique, IndirectHEK293 CellsHeLa CellsHumansMCF-7 CellsMicroscopy, ConfocalMicroscopy, FluorescenceProtein BindingReceptor, EphA2AntibodiesAptamers, NucleotideEGFR protein, humanEpitopesERBB2 protein, humanErb-b2 Receptor Tyrosine KinasesErbB ReceptorsReceptor, EphA2

Identifiers

PMID28235049
PMCPMC5325610
OpenAlexW2589924673

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.