Evidence map›Paper›PMID 28230078›Full record

ArticleScientific reports2017

Unravelling the metabolic impact of SBS-associated microbial dysbiosis: Insights from the piglet short bowel syndrome model.

Prue M Pereira-Fantini, Sean G Byars, James Pitt, Susan Lapthorne, Fiona Fouhy, Paul D Cotter, Julie E Bines

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 20 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Article
  5. Article
  6. Review
  7. Review
  8. A Novel Insight at Atherogenesis: The Role of Microbiome.Frontiers in cell and developmental biology · 2020
    Review
  9. Review
  10. Small intestinal bacterial overgrowth in children with intestinal failure on home parenteral nutrition.JGH open : an open access journal of gastroenterology and hepatology · 2019
    Article
  11. Review
  12. Host-Gut Microbiota Crosstalk in Intestinal Adaptation.Cellular and molecular gastroenterology and hepatology · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Prue M Pereira-FantiniIntestinal Failure and Clinical Nutrition Group, Murdoch Childrens Research Institute, Parkville, Australia.
Sean G ByarsCentre for Systems Genomics, School of Biosciences, The University of Melbourne, Parkville, Australia.
James PittVictorian Clinical Genetics Services, Murdoch Childrens Research Institute, Parkville, Australia.
Susan LapthorneIntestinal Failure and Clinical Nutrition Group, Murdoch Childrens Research Institute, Parkville, Australia.
Fiona FouhyTeagasc Food Research Centre, Moorepark, Fermoy, Ireland.
Paul D CotterTeagasc Food Research Centre, Moorepark, Fermoy, Ireland.
Julie E BinesIntestinal Failure and Clinical Nutrition Group, Murdoch Childrens Research Institute, Parkville, Australia.
Murdoch Children's Research Institute · AUTeagasc - The Irish Agriculture and Food Development Authority · IEUniversity of Melbourne · AURoyal Children's Hospital · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Liver disease is a major source of morbidity and mortality in children with short bowel syndrome (SBS). SBS-associated microbial dysbiosis has recently been implicated in the development of SBS-associated liver disease (SBS-ALD), however the pathological implications of this association have not been explored. In this study high-throughput sequencing of colonic content from the well-validated piglet SBS-ALD model was examined to determine alterations in microbial communities, and concurrent metabolic alterations identified in urine samples via targeted mass spectrometry approaches (GC-MS, LC-MS, FIA-MS) further uncovered impacts of microbial disturbance on metabolic outcomes in SBS-ALD. Multi-variate analyses were performed to elucidate contributing SBS-ALD microbe and metabolite panels and to identify microbe-metabolite interactions. A unique SBS-ALD microbe panel was clearest at the genus level, with discriminating bacteria predominantly from the Firmicutes and Bacteroidetes phyla. The SBS-ALD metabolome included important alterations in the microbial metabolism of amino acids and the mitochondrial metabolism of branched chain amino acids. Correlation analysis defined microbe-metabolite clustering patterns unique to SBS-ALD and identified a metabolite panel that correlates with dysbiosis of the gut microbiome in SBS.

Indexed as

Gastrointestinal MicrobiomeAnimalsAnimals, NewbornColonDisease Models, AnimalDysbiosisLiver DiseasesMass SpectrometryMetabolomeShort Bowel SyndromeSwineUrinalysisUrine

Identifiers

PMID28230078
PMCPMC5322370
OpenAlexW2589697601

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.