Evidence map›Paper›PMID 28229977›Full record

ReviewJournal of biosciences2017

Non-ribosomal peptide synthetases: Identifying the cryptic gene clusters and decoding the natural product.

Mangal Singh, Sandeep Chaudhary, Dipti Sareen

Abstract readReview
PubMed Publisher
In one paragraph

Review in Journal of biosciences, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
3.2field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 53 citations in OpenAlex.

  1. Genome Analysis ofJournal of fungi (Basel, Switzerland) · 2025
    Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. Revealing Hidden Genes inInternational journal of molecular sciences · 2024
    Article
  8. Article
  9. Isolation and Evaluation ofMicroorganisms · 2023
    Article
  10. Article
  11. Comprehensive genomic analysis ofComputational and structural biotechnology journal · 2023
    Article
  12. Article
  13. Review
  14. Review
  15. Review
  16. Review
  17. Review
  18. Anti-Foc RT4 Activity of a Newly IsolatedFrontiers in microbiology · 2020
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Mangal SinghDepartment of Biochemistry, Panjab University, Chandigarh, India.
Sandeep Chaudhary
Dipti Sareen
Panjab University · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Non-ribosomal peptide synthetases (NRPSs) and polyketide synthases (PKSs) present in bacteria and fungi are the major multi-modular enzyme complexes which synthesize secondary metabolites like the pharmacologically important antibiotics and siderophores. Each of the multiple modules of an NRPS activates a different amino or aryl acid, followed by their condensation to synthesize a linear or cyclic natural product. The studies on NRPS domains, the knowledge of their gene cluster architecture and tailoring enzymes have helped in the in silico genetic screening of the ever-expanding sequenced microbial genomic data for the identification of novel NRPS/PKS clusters and thus deciphering novel non-ribosomal peptides (NRPs). Adenylation domain is an integral part of the NRPSs and is the substrate selecting unit for the final assembled NRP. In some cases, it also requires a small protein, the MbtH homolog, for its optimum activity. The presence of putative adenylation domain and MbtH homologs in a sequenced genome can help identify the novel secondary metabolite producers. The role of the adenylation domain in the NRPS gene clusters and its characterization as a tool for the discovery of novel cryptic NRPS gene clusters are discussed.

Indexed as

Anti-Bacterial AgentsBacteriaBiological ProductsFungiHumansMultigene FamilyPeptide SynthasesPolyketide SynthasesSiderophoresAnti-Bacterial AgentsBiological Productsnon-ribosomal peptide synthasePeptide SynthasesPolyketide SynthasesSiderophores

Identifiers

PMID28229977
OpenAlexW2573041953

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.